RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 OR2T8A6NH00 312 aa11.96□□□□□ -0.49
SNF8-205ENST00000507302 IFITM5A6NNB3 132 aa11.96□□□□□ -0.49
SNF8-205ENST00000507302 UPK2O00526 184 aa11.96□□□□□ -0.49
SNF8-205ENST00000507302 RTL8CO15255 209 aa11.96□□□□□ -0.49
SNF8-205ENST00000507302 THOC7Q6I9Y2 204 aaKnown RBP11.96□□□□□ -0.49
SNF8-205ENST00000507302 OR10C1Q96KK4 312 aa11.96□□□□□ -0.49
SNF8-205ENST00000507302 TAS2R8Q9NYW2 309 aa11.96□□□□□ -0.49
SNF8-205ENST00000507302 TRAV1-2A0A0B4J238 106 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 METTL21EPA6NDL7 271 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 CHEK1O14757 476 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 SERPINE2P07093 398 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 TAS2R31P59538 309 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 WT1-ASQ06250 92 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 MLLT11Q13015 90 aaPredicted RBP11.95□□□□□ -0.5
SNF8-205ENST00000507302 HACD4Q5VWC8 232 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 ZNF773Q6PK81 442 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 HSD17B13Q7Z5P4 300 aaPredicted RBP11.95□□□□□ -0.5
SNF8-205ENST00000507302 OR10W1Q8NGF6 305 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 GPHA2Q96T91 129 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 QTRT1Q9BXR0 403 aaKnown RBP11.95□□□□□ -0.5
SNF8-205ENST00000507302 HSPG2P98160 4391 aa11.95□□□□□ -0.5
SNF8-205ENST00000507302 IGHV7-4-1A0A0J9YVY3 117 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 PTGES3LE9PB15 166 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 DEFB4AO15263 64 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 CTSGP08311 255 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 OR10A3P58181 314 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
SNF8-205ENST00000507302 PRSS29PA6NIE9 313 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 K7EIM0 57 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 CYB5BO43169 146 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 MRPS14O60783 128 aaKnown RBP11.93□□□□□ -0.5
SNF8-205ENST00000507302 HPRT1P00492 218 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 GIG44P09565 113 aaPredicted RBP11.93□□□□□ -0.5
SNF8-205ENST00000507302 RBMY1A1P0DJD3 496 aaKnown RBP11.93□□□□□ -0.5
SNF8-205ENST00000507302 RBMY1CP0DJD4 496 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 TMEM187Q14656 261 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 RBMY1FQ15415 496 aaKnown RBP11.93□□□□□ -0.5
SNF8-205ENST00000507302 CDNFQ49AH0 187 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 SPAG16Q8N0X2 631 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 CADM3Q8N126 398 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 COMMD5Q9GZQ3 224 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 DUSP21Q9H596 190 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 HRASLSQ9HDD0 168 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 C21orf62Q9NYP8 219 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 ANXA10Q9UJ72 324 aa11.93□□□□□ -0.5
SNF8-205ENST00000507302 F11RQ9Y624 299 aaKnown RBP11.93□□□□□ -0.5
SNF8-205ENST00000507302 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 IGHV3OR16-8A0A075B7F1 116 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 XRCC3O43542 346 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 ZNF207O43670 478 aaKnown RBP11.92□□□□□ -0.5
SNF8-205ENST00000507302 CA1P00915 261 aaPredicted RBP11.92□□□□□ -0.5
SNF8-205ENST00000507302 NQO2P16083 231 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
SNF8-205ENST00000507302 C20orf24Q9BUV8 137 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 RNF126Q9BV68 326 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 NDUFA4L2Q9NRX3 87 aa11.92□□□□□ -0.5
SNF8-205ENST00000507302 TEX50A0A1B0GTY4 177 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 ZNF705EA8MWA4 302 aaPredicted RBP11.91□□□□□ -0.5
SNF8-205ENST00000507302 PDCD5O14737 125 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 SSX5O60225 188 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 TRAPPC2P0DI81 140 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 TRAPPC2BP0DI82 140 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 OGFRL1Q5TC84 451 aaPredicted RBP11.91□□□□□ -0.5
SNF8-205ENST00000507302 NR2C2APQ86WQ0 139 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 TMEM116Q8NCL8 245 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 CCL28Q9NRJ3 127 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
SNF8-205ENST00000507302 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 TRAV10A0A0B4J240 114 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 CASQ2O14958 399 aaPredicted RBP11.9□□□□□ -0.5
SNF8-205ENST00000507302 DFFBO76075 338 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 AMBPP02760 352 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 CD5P06127 495 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 HSMCR30P0CW71 290 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 HLA-DMBP28068 263 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 LGALS9BQ3B8N2 356 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 PVRIGQ6DKI7 326 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 Q6ZTC4 211 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 POM121L12Q8N7R1 296 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 NUDCD2Q8WVJ2 157 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 MGLLQ99685 303 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 ATG5Q9H1Y0 275 aa11.9□□□□□ -0.5
SNF8-205ENST00000507302 IGHV4-28A0A0C4DH34 117 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 TNFSF12O43508 249 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 MIFP14174 115 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 OR1L8Q8NGR8 309 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 VSIRQ9H7M9 311 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 SCN3BQ9NY72 215 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
SNF8-205ENST00000507302 AGRNO00468 2067 aa11.88□□□□□ -0.51
SNF8-205ENST00000507302 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
SNF8-205ENST00000507302 SULT1C2O00338 296 aa11.88□□□□□ -0.51
SNF8-205ENST00000507302 TFPI2P48307 235 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms