RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MRPL48Q96GC5 212 aaKnown RBP4.99□□□□□ -1.61
VCAN-207ENST00000507162 ADTRPQ96IZ2 230 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 NEU1Q99519 415 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 HDHD3Q9BSH5 251 aaPredicted RBP4.99□□□□□ -1.61
VCAN-207ENST00000507162 TMEM70Q9BUB7 260 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 PLEKHJ1Q9NW61 149 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 C21orf62Q9NYP8 219 aa4.99□□□□□ -1.61
VCAN-207ENST00000507162 YTHDF2Q9Y5A9 579 aaKnown RBP4.99□□□□□ -1.61
VCAN-207ENST00000507162 PUS1Q9Y606 427 aaKnown RBP eCLIP4.99□□□□□ -1.61
VCAN-207ENST00000507162 IGKV1-6A0A0C4DH72 117 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 ZAR1LA6NP61 321 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 J3QRK9 145 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 KBTBD11O94819 623 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 APOHP02749 345 aaPredicted RBP4.98□□□□□ -1.61
VCAN-207ENST00000507162 DUTP33316 252 aaKnown RBP4.98□□□□□ -1.61
VCAN-207ENST00000507162 GTF2A1P52655 376 aaPredicted RBP4.98□□□□□ -1.61
VCAN-207ENST00000507162 RELQ04864 619 aaPredicted RBP4.98□□□□□ -1.61
VCAN-207ENST00000507162 TMEM69Q5SWH9 247 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
VCAN-207ENST00000507162 CBR4Q8N4T8 237 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 SCARB1Q8WTV0 552 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 DNAJC9Q8WXX5 260 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 FAM30AQ9NZY2 134 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 HSF4Q9ULV5 492 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 TNFRSF18Q9Y5U5 241 aa4.98□□□□□ -1.61
VCAN-207ENST00000507162 A0A087WTM6 91 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 TRAV2A0A0B4J234 112 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 LOC102723971A0A1B0GUV8 181 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 A0A1W2PPK0 400 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 ZNF705FA8MVS1 300 aaPredicted RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 CYB5BO43169 146 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 CTSGP08311 255 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 ZNF705DP0CH99 300 aaPredicted RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 ZNF705BP0CI00 300 aaPredicted RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 DEFB130BP0DP73 79 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 DEFB130AP0DP74 79 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 HTR2CP28335 458 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 PRDX6P30041 224 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 GNRHRP30968 328 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 FGF9P31371 208 aaPredicted RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 SCAND1P57086 179 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 RPL8P62917 257 aaKnown RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 MS4A2Q01362 244 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 ARFRP1Q13795 201 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 OR10K2Q6IF99 312 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 ZNF705AQ6ZN79 300 aaPredicted RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 VSTM2AQ8TAG5 236 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 TMEM167AQ8TBQ9 72 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 GGHQ92820 318 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 FAM212BQ9NTI7 297 aaPredicted RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 IMPAD1Q9NX62 359 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 CKLFQ9UBR5 152 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 GHRLQ9UBU3 117 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 AK3Q9UIJ7 227 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 MGAT4AQ9UM21 535 aa4.97□□□□□ -1.61
VCAN-207ENST00000507162 EXOGQ9Y2C4 368 aaKnown RBP4.97□□□□□ -1.61
VCAN-207ENST00000507162 TRAV8-7A0A075B6U6 113 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 IGLV5-52A0A0A0MRZ9 124 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 CGB1A6NKQ9 187 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 TRDCB7Z8K6 153 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 J3QRE1 110 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 K7EQG2 157 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 IGKV3-20P01619 116 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 HBE1P02100 147 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 HLA-GP17693 338 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 IGFBP3P17936 291 aaPredicted RBP4.96□□□□□ -1.62
VCAN-207ENST00000507162 PSMG4Q5JS54 123 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 ADGRG5Q8IZF4 528 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 OR10J5Q8NHC4 309 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 CANT1Q8WVQ1 401 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 RNF125Q96EQ8 232 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 GRAMD2BQ96HH9 432 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 OR10C1Q96KK4 312 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 MYCBPQ99417 103 aaPredicted RBP4.96□□□□□ -1.62
VCAN-207ENST00000507162 C7orf50Q9BRJ6 194 aaKnown RBP4.96□□□□□ -1.62
VCAN-207ENST00000507162 TM2D1Q9BX74 207 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 VSIRQ9H7M9 311 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 HRASLSQ9HDD0 168 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 PRELID3BQ9Y3B1 194 aa4.96□□□□□ -1.62
VCAN-207ENST00000507162 TRBV6-6A0A0A6YYG2 114 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 IGLC7A0M8Q6 106 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 OR13C7P0DN81 318 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 POLR2IP36954 125 aaKnown RBP4.95□□□□□ -1.62
VCAN-207ENST00000507162 SERPINB10P48595 397 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 DHRS2Q13268 280 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 KIR3DS1Q14943 382 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 FCN2Q15485 313 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 ESRGQ1W209 222 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 IGSF11Q5DX21 431 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 PUSL1Q8N0Z8 303 aaKnown RBP4.95□□□□□ -1.62
VCAN-207ENST00000507162 SYS1Q8N2H4 156 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 ZNF114Q8NC26 417 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 OR10W1Q8NGF6 305 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 GINS3Q9BRX5 216 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 MAGT1Q9H0U3 335 aa4.95□□□□□ -1.62
VCAN-207ENST00000507162 MRPS7Q9Y2R9 242 aaKnown RBP4.95□□□□□ -1.62
VCAN-207ENST00000507162 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 H3BMM0 161 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms