RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 C20orf85Q9H1P6 137 aa7.58□□□□□ -1.2
SFXN1-205ENST00000506963 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
SFXN1-205ENST00000506963 COA4Q9NYJ1 87 aa7.58□□□□□ -1.2
SFXN1-205ENST00000506963 CACFD1Q9UGQ2 172 aa7.58□□□□□ -1.2
SFXN1-205ENST00000506963 FLVCR2Q9UPI3 526 aa7.58□□□□□ -1.2
SFXN1-205ENST00000506963 TRBV9A0A0B4J1U6 114 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 A0A0G2JRQ6 117 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 FAM240BA0A1B0GVZ2 78 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 C9orf170A2RU37 121 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 DUS4LO95620 317 aaKnown RBP7.57□□□□□ -1.2
SFXN1-205ENST00000506963 OR4E1P0C645 316 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 TRAPPC2P0DI81 140 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 TRAPPC2BP0DI82 140 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 PF4V1P10720 104 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 MYOD1P15172 320 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 CTRB1P17538 263 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 VAMP1P23763 118 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 PSMB6P28072 239 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 DEFA1P59665 94 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 DEFA3P59666 94 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 HSPE1P61604 102 aaKnown RBP7.57□□□□□ -1.2
SFXN1-205ENST00000506963 PRCDQ00LT1 54 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 DHRS2Q13268 280 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 ANKRD55Q3KP44 614 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 CTRB2Q6GPI1 263 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 TMEM65Q6PI78 240 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 Q6ZRM9 215 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 LYG2Q86SG7 212 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 ZNF491Q8N8L2 437 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 OR4F17Q8NGA8 305 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 OR4A16Q8NH70 328 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 FYTTD1Q96QD9 318 aaKnown RBP7.57□□□□□ -1.2
SFXN1-205ENST00000506963 OR4F4Q96R69 305 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 PALMDQ9NP74 551 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 NUDT15Q9NV35 164 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 NSG2Q9Y328 171 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 OR51B2Q9Y5P1 312 aa7.57□□□□□ -1.2
SFXN1-205ENST00000506963 HMX3A6NHT5 357 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 DHFRP00374 187 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 HLA-AP01891 365 aaKnown RBP7.56□□□□□ -1.2
SFXN1-205ENST00000506963 SLC25A6P12236 298 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 AREGP15514 252 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 ANXA7P20073 488 aaKnown RBP7.56□□□□□ -1.2
SFXN1-205ENST00000506963 RAB25P57735 213 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 WT1-ASQ06250 92 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 IZUMO4Q1ZYL8 232 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 MRPL41Q8IXM3 137 aaKnown RBP7.56□□□□□ -1.2
SFXN1-205ENST00000506963 ZNF114Q8NC26 417 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 OR5T1Q8NG75 326 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 MITD1Q8WV92 249 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 C4orf3Q8WVX3 66 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 GPR146Q96CH1 333 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 USMG5Q96IX5 58 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 KRTAP3-3Q9BYR6 98 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 KRTAP3-2Q9BYR7 98 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.56□□□□□ -1.2
SFXN1-205ENST00000506963 TMED3Q9Y3Q3 217 aa7.56□□□□□ -1.2
SFXN1-205ENST00000506963 NOTCH3Q9UM47 2321 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 VWFP04275 2813 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 IGLV11-55A0A075B6I3 123 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 A0A0G2JLM5 398 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 A0A1B0GU03 582 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 FAM223BA6NKX1 122 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 I3L521 148 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 ST8SIA3O43173 380 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 PITX3O75364 302 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 TRGV3P03979 118 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 H2AFB2P0C5Z0 115 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 HIST1H1BP16401 226 aaKnown RBP7.55□□□□□ -1.2
SFXN1-205ENST00000506963 FHL3Q13643 280 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 HIST2H2BDQ6DRA6 164 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 LCNL1Q6ZST4 164 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 LYZL2Q7Z4W2 148 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 NRARPQ7Z6K4 114 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 FAM223AQ8IWN6 122 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 NECAP1Q8NC96 275 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 OR10W1Q8NGF6 305 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 OR1L6Q8NGR2 347 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 RNASE11Q8TAA1 199 aaKnown RBP7.55□□□□□ -1.2
SFXN1-205ENST00000506963 ENKURQ8TC29 256 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 FANCD2OSQ96PS1 177 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 PRR13Q9NZ81 148 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 CACNG5Q9UF02 275 aa7.55□□□□□ -1.2
SFXN1-205ENST00000506963 TRAV6A0A075B6T7 132 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 TSPAN15O95858 294 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 IL5P05113 134 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 LGALS1P09382 135 aaKnown RBP7.54□□□□□ -1.2
SFXN1-205ENST00000506963 APELAP0DMC3 54 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 SULT1A3P0DMM9 295 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 SULT1A4P0DMN0 295 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 OR13C7P0DN81 318 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 MYCNOSP40205 109 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 TPPP2P59282 170 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 SPCS3P61009 180 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 SMCO1Q147U7 214 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 NSUN5P1Q3KNT7 163 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 C4orf46Q504U0 113 aa7.54□□□□□ -1.2
SFXN1-205ENST00000506963 KHDC1LQ5JSQ8 128 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms