RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 HSPB1P04792 205 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SERPINE2P07093 398 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF735P0CB33 412 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUX4L2P0CJ85 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUX4L3P0CJ86 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUX4L5P0CJ88 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUX4L6P0CJ89 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUX4L7P0CJ90 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF728P0DKX0 622 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PPIAL4FP0DN26 164 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PTHLHP12272 177 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RPA2P15927 270 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PVALBP20472 110 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 NFYAP23511 347 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RBMXP38159 391 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 GABRA2P47869 451 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PPOXP50336 477 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB14P61106 215 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ERVS71-1P61550 626 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 EIF5AP63241 154 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 HLA-DRB3P79483 266 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 MRPS11P82912 194 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 HTD2P86397 168 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 MEF2CQ06413 473 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DHRS2Q13268 280 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SMCO1Q147U7 214 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DMRTC1Q5HYR2 192 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM255AQ5JRV8 349 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 AADACL3Q5VUY0 350 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TEX36Q5VZQ5 186 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR52W1Q6IF63 320 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 EIF5AL1Q6IS14 154 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 Q6P435 159 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 WDR82Q6UXN9 313 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ACP7Q6ZNF0 438 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ERASQ7Z444 233 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 LHFPL4Q7Z7J7 247 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 BIVMQ86UB2 503 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 LHFPL1Q86WI0 220 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 LGI3Q8N145 548 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 LINC01561Q8N1V8 128 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 GAPTQ8N292 157 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 MUC15Q8N387 334 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RPRMLQ8N4K4 120 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ASCC1Q8N9N2 400 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 INO80EQ8NBZ0 244 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR10A7Q8NGE5 316 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR13C8Q8NGS7 320 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2T35Q8NGX2 323 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 MARCH1Q8TCQ1 289 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 CD300LFQ8TDQ1 290 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 LRRC29Q8WV35 223 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RTN4IP1Q8WWV3 396 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RDH5Q92781 318 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB1CQ92928 201 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 IL22RA2Q969J5 263 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 GALNT14Q96FL9 552 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SDSLQ96GA7 329 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TIMD4Q96H15 378 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 C2orf50Q96LR7 162 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2V2Q96R30 315 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2A7Q96R45 310 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SPIN2AQ99865 258 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SPIN2BQ9BPZ2 258 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SULT4A1Q9BR01 284 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SUCNR1Q9BXA5 334 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 MRPL37Q9BZE1 423 aaKnown RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 NMES1Q9C002 83 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 Q9H3A6 140 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 GAL3ST2Q9H3Q3 398 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PLEKHF2Q9H8W4 249 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TAF9BQ9HBM6 251 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM165Q9HC07 324 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC2A9Q9NRM0 540 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 UFSP2Q9NUQ7 469 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 DUX4Q9UBX2 424 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF230Q9UIE0 474 aaPredicted RBP1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 PPIAL4AQ9Y536 164 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SPTBP11277 2137 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF462Q96JM2 2506 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 SCN2AQ99250 2005 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 CEP250Q9BV73 2442 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 EXPH5Q8NEV8 1989 aa1.76□□□□□ -2.13
TOPBP1-205ENST00000506779 KNL1Q8NG31 2342 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 CPAMD8Q8IZJ3 1885 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 GOLGA4Q13439 2230 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SDK1Q7Z5N4 2213 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ASCC3Q8N3C0 2202 aaKnown RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 FRYLO94915 3013 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 SPTA1P02549 2419 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 HEATR5AQ86XA9 2040 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1D-17A0A075B6S4 117 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV1-69-2A0A0G2JMI3 117 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 LOC100131303A0A0U1RQF7 123 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 C3orf85A0A1B0GTC6 90 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ODAMA1E959 279 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM231BA6NCW3 169 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 OR5H14A6NHG9 310 aa1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF729A6NN14 1252 aaPredicted RBP1.75□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM25EA8MYX2 175 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms