RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 OR10W1Q8NGF6 305 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 TERB2Q8NHR7 220 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 MCFD2Q8NI22 146 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 TSC22D3Q99576 134 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 B9D2Q9BPU9 175 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 PRNDQ9UKY0 176 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 OR51B2Q9Y5P1 312 aa11.88□□□□□ -0.51
MED28-204ENST00000506409 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 IGHV3-23P01764 117 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 PTBP1P26599 531 aaKnown RBP eCLIP11.87□□□□□ -0.51
MED28-204ENST00000506409 MEF2DQ14814 521 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 KLK9Q2XQG4 91 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 FAAP20Q6NZ36 180 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
MED28-204ENST00000506409 ZFAND1Q8TCF1 268 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 EEF1AKMT3Q96AZ1 226 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 HINT2Q9BX68 163 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 FKBP11Q9NYL4 201 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 KLK9Q9UKQ9 250 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 S4R3C0 116 aa11.87□□□□□ -0.51
MED28-204ENST00000506409 PPP5D1E7EU14 171 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 H0Y980 276 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 IGKV1-39P01597 117 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 IGKV1D-39P04432 117 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 OR13C7P0DN81 318 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 GP9P14770 177 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 TNFSF8P32971 234 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 WT1-ASQ06250 92 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 CLEC19AQ6UXS0 136 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 IL34Q6ZMJ4 242 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 H2BFWTQ7Z2G1 175 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 GDPD1Q8N9F7 314 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 CCDC71LQ8N9Z2 235 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 OR13C8Q8NGS7 320 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 OR5B3Q8NH48 314 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 LSM10Q969L4 123 aaKnown RBP11.86□□□□□ -0.51
MED28-204ENST00000506409 MRGPRFQ96AM1 343 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 SEC22AQ96IW7 307 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 CXorf58Q96LI9 332 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 NXF2Q9GZY0 626 aaKnown RBP11.86□□□□□ -0.51
MED28-204ENST00000506409 NDUFA4L2Q9NRX3 87 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 THYN1Q9P016 225 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 COPZ2Q9P299 210 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 PEMTQ9UBM1 199 aa11.86□□□□□ -0.51
MED28-204ENST00000506409 RSL24D1Q9UHA3 163 aaKnown RBP11.86□□□□□ -0.51
MED28-204ENST00000506409 FABP12A6NFH5 140 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 C15orf61A6NNL5 157 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 DISC1C4P0D8 188 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 CYB5BO43169 146 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 GGCTO75223 188 aaKnown RBP11.85□□□□□ -0.51
MED28-204ENST00000506409 HLA-AP01891 365 aaKnown RBP11.85□□□□□ -0.51
MED28-204ENST00000506409 AKAIN1P0CW23 69 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 OR4A16Q8NH70 328 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 MARCH1Q8TCQ1 289 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 TP53RKQ96S44 253 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 DMRT1Q9Y5R6 373 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 SMAD5-AS1Q9Y6J3 95 aa11.85□□□□□ -0.51
MED28-204ENST00000506409 TRBV7-1A0A0A6YYK4 115 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 MFSD2BA6NFX1 497 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 DBX1A6NMT0 343 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 GSTZ1O43708 216 aaPredicted RBP11.84□□□□□ -0.51
MED28-204ENST00000506409 CSN3P07498 182 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 ARL3P36405 182 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 MECP2P51608 486 aaKnown RBP11.84□□□□□ -0.51
MED28-204ENST00000506409 OR4C16Q8NGL9 310 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 SIGLEC8Q9NYZ4 499 aa11.84□□□□□ -0.51
MED28-204ENST00000506409 OR2C1O95371 312 aa11.83□□□□□ -0.52
MED28-204ENST00000506409 CTSDP07339 412 aaPredicted RBP11.83□□□□□ -0.52
MED28-204ENST00000506409 AKR1C2P52895 323 aa11.83□□□□□ -0.52
MED28-204ENST00000506409 SLC25A24Q6NUK1 477 aa11.83□□□□□ -0.52
MED28-204ENST00000506409 PRRT1Q99946 306 aa11.83□□□□□ -0.52
MED28-204ENST00000506409 SOSTQ9BQB4 213 aa11.83□□□□□ -0.52
MED28-204ENST00000506409 C14orf166Q9Y224 244 aaKnown RBP11.83□□□□□ -0.52
MED28-204ENST00000506409 F11RQ9Y624 299 aaKnown RBP11.83□□□□□ -0.52
MED28-204ENST00000506409 ANKRD20A5PA0PJZ0 165 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 ATG12O94817 140 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 CLEC3BP05452 202 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 SURF2Q15527 256 aaPredicted RBP11.82□□□□□ -0.52
MED28-204ENST00000506409 TRIM16LQ309B1 348 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 SP6Q3SY56 376 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 C11orf87Q6NUJ2 197 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 ZNF502Q8TBZ5 544 aa11.82□□□□□ -0.52
MED28-204ENST00000506409 RBM38Q9H0Z9 239 aaKnown RBP11.82□□□□□ -0.52
MED28-204ENST00000506409 LGALS9O00182 355 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 B3GALNT1O75752 331 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 IGKV1-5P01602 117 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 GPR183P32249 361 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 IZUMO4Q1ZYL8 232 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 LCN12Q6JVE5 192 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 OR1L6Q8NGR2 347 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 VN1R17PQ8TDU5 208 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
MED28-204ENST00000506409 TEX13DA0A0J9YY54 714 aaPredicted RBP11.8□□□□□ -0.52
MED28-204ENST00000506409 ZNF320A2RRD8 509 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms