RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 EEF1AKMT3Q96AZ1 226 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 FYTTD1Q96QD9 318 aaKnown RBP4.97□□□□□ -1.61
VCAN-206ENST00000505615 SPIN2AQ99865 258 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 SPIN2BQ9BPZ2 258 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 SELENOIQ9C0D9 397 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 ZNF221Q9UK13 617 aa4.97□□□□□ -1.61
VCAN-206ENST00000505615 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.61
VCAN-206ENST00000505615 A0A075B6Q4 140 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 IGKV1-6A0A0C4DH72 117 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 E7EUB6 86 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 K7EQM0 130 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 CTDSPLO15194 276 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 IL6RP08887 468 aaPredicted RBP4.96□□□□□ -1.62
VCAN-206ENST00000505615 SAA1P0DJI8 122 aaPredicted RBP4.96□□□□□ -1.62
VCAN-206ENST00000505615 PTBP1P26599 531 aaKnown RBP eCLIP4.96□□□□□ -1.62
VCAN-206ENST00000505615 GPR183P32249 361 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 NUP62P37198 522 aaPredicted RBP4.96□□□□□ -1.62
VCAN-206ENST00000505615 CEACAM6P40199 344 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 XGP55808 180 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 RPS27AP62979 156 aaKnown RBP4.96□□□□□ -1.62
VCAN-206ENST00000505615 PPP3R1P63098 170 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 KDM4DQ6B0I6 523 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 MOB1BQ7L9L4 216 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 SYS1Q8N2H4 156 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 C6orf223Q8N319 242 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 ACBD7Q8N6N7 88 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.96□□□□□ -1.62
VCAN-206ENST00000505615 ZNF502Q8TBZ5 544 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 ZNF414Q96IQ9 312 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 DAZ1Q9NQZ3 744 aaKnown RBP4.96□□□□□ -1.62
VCAN-206ENST00000505615 SLC2A9Q9NRM0 540 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 ETV7Q9Y603 341 aa4.96□□□□□ -1.62
VCAN-206ENST00000505615 IGLV11-55A0A075B6I3 123 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 TRAV8-7A0A075B6U6 113 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 TRBV6-6A0A0A6YYG2 114 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 TRBV7-1A0A0A6YYK4 115 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 NBDYA0A0U1RRE5 68 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 F5H697 171 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 DYNC1I1O14576 645 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 FKBP6O75344 327 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 CD2P06729 351 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 CRYGCP07315 174 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 RPA2P15927 270 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 C4BPBP20851 252 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 GCSHP23434 173 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 POLR2IP36954 125 aaKnown RBP4.95□□□□□ -1.62
VCAN-206ENST00000505615 GTF2A1P52655 376 aaPredicted RBP4.95□□□□□ -1.62
VCAN-206ENST00000505615 HLA-DRB3P79483 266 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 TMEM41BQ5BJD5 291 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 XAF1Q6GPH4 301 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 MORN3Q6PF18 240 aaPredicted RBP4.95□□□□□ -1.62
VCAN-206ENST00000505615 C6orf201Q7Z4U5 140 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 LHFPL3Q86UP9 236 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 OR8J1Q8NGP2 316 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 GPR148Q8TDV2 347 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 RFKQ969G6 155 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 CCDC124Q96CT7 223 aaKnown RBP4.95□□□□□ -1.62
VCAN-206ENST00000505615 RNF2Q99496 336 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 FAAP24Q9BTP7 215 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 CHMP1AQ9HD42 196 aaPredicted RBP4.95□□□□□ -1.62
VCAN-206ENST00000505615 SDHAF2Q9NX18 166 aa4.95□□□□□ -1.62
VCAN-206ENST00000505615 IGHV3OR16-8A0A075B7F1 116 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 WRBO00258 174 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 TGOLN2O43493 480 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 ZNF207O43670 478 aaKnown RBP4.94□□□□□ -1.62
VCAN-206ENST00000505615 TRIAP1O43715 76 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 CIDEAO60543 219 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 MRPS14O60783 128 aaKnown RBP4.94□□□□□ -1.62
VCAN-206ENST00000505615 CRTAPO75718 401 aaPredicted RBP4.94□□□□□ -1.62
VCAN-206ENST00000505615 CRYZL1O95825 349 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 ZBTB25P24278 435 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 TFPI2P48307 235 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 SNRPGP62308 76 aaKnown RBP4.94□□□□□ -1.62
VCAN-206ENST00000505615 CDK10Q15131 360 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 RTL8BQ17RB0 113 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 AWAT2Q6E213 333 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 Q6ZSN1 163 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 SSX9Q7RTT3 188 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 AQP12AQ8IXF9 295 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 MMD2Q8IY49 270 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 ARHGAP24Q8N264 748 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 CSNK1G2-AS1Q8NCQ2 148 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 LGALS12Q96DT0 336 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 FAM210BQ96KR6 192 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 HDHD3Q9BSH5 251 aaPredicted RBP4.94□□□□□ -1.62
VCAN-206ENST00000505615 THTPAQ9BU02 230 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 MDFICQ9P1T7 246 aa4.94□□□□□ -1.62
VCAN-206ENST00000505615 EXOGQ9Y2C4 368 aaKnown RBP4.94□□□□□ -1.62
VCAN-206ENST00000505615 TRBV5-5A0A0J9YX44 114 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 CBY3A6NI87 242 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 LINC00473A8K010 186 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 CHEK1O14757 476 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 FCGR3BO75015 233 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 WBP4O75554 376 aaKnown RBP4.93□□□□□ -1.62
VCAN-206ENST00000505615 GSTT2P0CG29 244 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 GSTT2BP0CG30 244 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 RRASP10301 218 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 SPP1P10451 314 aa4.93□□□□□ -1.62
VCAN-206ENST00000505615 HIST1H1BP16401 226 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms