RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 IGLV1-51P01701 117 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 IGHV3-23P01764 117 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 HLA-AP01891 365 aaKnown RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 AREGP15514 252 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 LGALS7P47929 136 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 RHOGP84095 191 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 PITPNAQ00169 270 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 TMEM267Q0VDI3 215 aaPredicted RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 KLF5Q13887 457 aaPredicted RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 CDK10Q15131 360 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 ZNF343Q6P1L6 599 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 SSX9Q7RTT3 188 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 ZNF429Q86V71 674 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 TPRA1Q86W33 373 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 BEST4Q8NFU0 473 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 OSR1Q8TAX0 266 aaPredicted RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 TCTEX1D2Q8WW35 142 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 PHB2Q99623 299 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 THAP7Q9BT49 309 aaPredicted RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 WFDC10AQ9H1F0 79 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 CCL28Q9NRJ3 127 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 GAR1Q9NY12 217 aaKnown RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 SMAD5-AS1Q9Y6J3 95 aa3.68□□□□□ -1.82
CDH9-203ENST00000505045 EPPK1P58107 5090 aaKnown RBP3.68□□□□□ -1.82
CDH9-203ENST00000505045 TRBV9A0A0B4J1U6 114 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 TRAV3A0A0B4J244 114 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 C13orf42A0A1B0GVH6 325 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 H3BUA1 57 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 CCNKO75909 580 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 OR2J3O76001 311 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 PPYP01298 95 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 REG1AP05451 166 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 IL6RP08887 468 aaPredicted RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 OR9G9P0C7N8 305 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 IGHV4-30-4P0DP06 118 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 FCGR2CP31995 323 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 INSL3P51460 131 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 ELLP55199 621 aaPredicted RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 FXYD4P59646 89 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 NCS1P62166 190 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 EXOSC2Q13868 293 aaKnown RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 VMA21Q3ZAQ7 101 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 CNIH2Q6PI25 160 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 ZNF818PQ6ZRF7 136 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 TMEM17Q86X19 198 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 HOGA1Q86XE5 327 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 SNX29P2Q8IUI4 249 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 IQCF2Q8IXL9 164 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 PUSL1Q8N0Z8 303 aaKnown RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 TEX45Q8NA69 505 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 OR9G4Q8NGQ1 327 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 MCFD2Q8NI22 146 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 CACNG8Q8WXS5 425 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 TRIM63Q969Q1 353 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 RCHY1Q96PM5 261 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 DCSTAMPQ9H295 470 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 AUNIPQ9H7T9 357 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 ETV7Q9Y603 341 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 DNAH1Q9P2D7 4330 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 LOC105371267A0A1B0GV96 52 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 MFSD2BA6NFX1 497 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 SULT1C2O00338 296 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 MPPED1O15442 326 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 BRI3O95415 125 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 APOA1P02647 267 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 CSN3P07498 182 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 RRASP10301 218 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 RPA2P15927 270 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 NKX2-5P52952 324 aaPredicted RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 DEFA1P59665 94 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 DEFA3P59666 94 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 VBP1P61758 197 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 C15orf32Q32M92 178 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 TIMM50Q3ZCQ8 353 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 OR4A47Q6IF82 309 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 OR51H1Q8NH63 302 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 OR4S2Q8NH73 311 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 TMEM167AQ8TBQ9 72 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 SUN5Q8TC36 379 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 ADTRPQ96IZ2 230 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 AIFM2Q9BRQ8 373 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 SLIRPQ9GZT3 109 aaKnown RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 NXF2Q9GZY0 626 aaKnown RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 FXYD6Q9H0Q3 95 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 RANGRFQ9HD47 186 aaPredicted RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 PEF1Q9UBV8 284 aaKnown RBP3.67□□□□□ -1.82
CDH9-203ENST00000505045 ANAPC10Q9UM13 185 aa3.67□□□□□ -1.82
CDH9-203ENST00000505045 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.66□□□□□ -1.82
CDH9-203ENST00000505045 IGLC7A0M8Q6 106 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 AIREO43918 545 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 SCGNO76038 276 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 OR2A4O95047 310 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 S1PR2O95136 353 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 NDUFB8O95169 186 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 RLN1P04808 185 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 ZNF735P0CB33 412 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 ZP3P21754 424 aa3.66□□□□□ -1.82
CDH9-203ENST00000505045 GNRHRP30968 328 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms