RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 Q8N9W7 124 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 OR2T10Q8NGZ9 312 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 VSTM2AQ8TAG5 236 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 FBXL17Q9UF56 701 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 BAHCC1Q9P281 2608 aa8.26□□□□□ -1.09
TPM3-217ENST00000504663 A0A0D9SG52 128 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 IGLC7A0M8Q6 106 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 A6NDX4 124 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 CD5LO43866 347 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 AMY1AP04745 511 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 TMEM11P17152 192 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 COMPP49747 757 aaPredicted RBP8.25□□□□□ -1.09
TPM3-217ENST00000504663 AP2S1P53680 142 aaPredicted RBP8.25□□□□□ -1.09
TPM3-217ENST00000504663 WT1-ASQ06250 92 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 TMEM267Q0VDI3 215 aaPredicted RBP8.25□□□□□ -1.09
TPM3-217ENST00000504663 MMDQ15546 238 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 DEFB112Q30KQ8 113 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 PVRIGQ6DKI7 326 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 OR10W1Q8NGF6 305 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 OR5B3Q8NH48 314 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 AIFM2Q9BRQ8 373 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 ARL6Q9H0F7 186 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 PRDM13Q9H4Q3 707 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 FBXO7Q9Y3I1 522 aa8.25□□□□□ -1.09
TPM3-217ENST00000504663 CYSRT1A8MQ03 144 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 CEBPZOSA8MTT3 80 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 RGS13O14921 159 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 MED6O75586 246 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 SNAPC5O75971 98 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 CA2P00918 260 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 IFNA17P01571 189 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 OPN1MWP04001 364 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 RLN2P04090 185 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 OPN1MW2P0DN77 364 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 OPN1MW3P0DN78 364 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 RNASE2P10153 161 aaKnown RBP8.24□□□□□ -1.09
TPM3-217ENST00000504663 PF4V1P10720 104 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 EGR2P11161 476 aaPredicted RBP8.24□□□□□ -1.09
TPM3-217ENST00000504663 BPIFB3P59826 476 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 HNF4GQ14541 408 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 AANATQ16613 207 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 LRRC75BQ2VPJ9 315 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 ASPHD1Q5U4P2 390 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 C19orf35Q6ZS72 473 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 STOML3Q8TAV4 291 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 ARV1Q9H2C2 271 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 DMRT1Q9Y5R6 373 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 NOTCH2Q04721 2471 aa8.24□□□□□ -1.09
TPM3-217ENST00000504663 IGHV7-81A0A0B4J1V7 117 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 CST7O76096 145 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 GHRHP01286 108 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 HLA-DRB1P01911 266 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 FBP1P09467 338 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 METTL15P1P0C7V9 234 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 PVALBP20472 110 aaPredicted RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 BRS3P32247 399 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 MAS1LP35410 378 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 HOXA1P49639 335 aaPredicted RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 SULT1A1P50225 295 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 CAV2P51636 162 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 MFAP2P55001 183 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 RPL23AP62750 156 aaKnown RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 VAMP2P63027 116 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 BAXQ07812 192 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 RPL7L1Q6DKI1 246 aaKnown RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 C5orf56Q8N8D9 126 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 INO80EQ8NBZ0 244 aaPredicted RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 OR1L8Q8NGR8 309 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 SRSF12Q8WXF0 261 aaKnown RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 RBM14Q96PK6 669 aaKnown RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 CIB3Q96Q77 187 aaPredicted RBP8.23□□□□□ -1.09
TPM3-217ENST00000504663 CLCC1Q96S66 551 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 HSPB9Q9BQS6 159 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 GON7Q9BXV9 100 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 SMIM3Q9BZL3 60 aa8.23□□□□□ -1.09
TPM3-217ENST00000504663 FLNBO75369 2602 aaKnown RBP8.22□□□□□ -1.09
TPM3-217ENST00000504663 H3BUX3 64 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 RBMXL2O75526 392 aaKnown RBP8.22□□□□□ -1.09
TPM3-217ENST00000504663 FAM106CPP0CH98 169 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 AREGP15514 252 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 MDKP21741 143 aaPredicted RBP8.22□□□□□ -1.09
TPM3-217ENST00000504663 RPL27AP46776 148 aaKnown RBP8.22□□□□□ -1.09
TPM3-217ENST00000504663 TNP2Q05952 138 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 HES1Q14469 280 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 TNXAQ16473 311 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 VWC2Q2TAL6 325 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 IL17RELQ6ZVW7 336 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 TMEM219Q86XT9 240 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 ZNF114Q8NC26 417 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 OR8H1Q8NGG4 311 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 C22orf15Q8WYQ4 148 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 ST8SIA2Q92186 375 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 SSX3Q99909 188 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 SLC25A33Q9BSK2 321 aa8.22□□□□□ -1.09
TPM3-217ENST00000504663 SLA2Q9H6Q3 261 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms