RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 MAS1LP35410 378 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 EXOSC2Q13868 293 aaKnown RBP10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 VSTM2AQ8TAG5 236 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 CCDC140Q96MF4 163 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 OR4C12Q96R67 309 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 SLC2A9Q9NRM0 540 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 C19orf73Q9NVV2 129 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 MCUBQ9NWR8 336 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 ZNF257Q9Y2Q1 563 aa10.63□□□□□ -0.71
PDLIM7-211ENST00000504318 TRAV3A0A0B4J244 114 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 CTRB1P17538 263 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 KIR2DS2P43631 304 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 RPL27AP46776 148 aaKnown RBP10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 CTRB2Q6GPI1 263 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 OR4A47Q6IF82 309 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 STEAP1BQ6NZ63 245 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 SPAG16Q8N0X2 631 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 NECAP1Q8NC96 275 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 MOB3AQ96BX8 217 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 ELOVL1Q9BW60 279 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 SLC5A7Q9GZV3 580 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 NUDT15Q9NV35 164 aa10.62□□□□□ -0.71
PDLIM7-211ENST00000504318 IGLC7A0M8Q6 106 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 IZUMO1RA6ND01 250 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 PRAF2O60831 178 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 OR2J3O76001 311 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 RAB3DO95716 219 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 CD74P04233 296 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 FGF2P09038 288 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 H2AFB2P0C5Z0 115 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 EDN2P20800 178 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 HLA-DMAP28067 261 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 PSMB6P28072 239 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 TAS2R31P59538 309 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 TATDN3Q17R31 274 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 C15orf32Q32M92 178 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 SSX9Q7RTT3 188 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 AKAP14Q86UN6 197 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 OR4C16Q8NGL9 310 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 OR4A5Q8NH83 315 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 FYTTD1Q96QD9 318 aaKnown RBP10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 LYSTQ99698 3801 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
PDLIM7-211ENST00000504318 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 DISC1C4P0D8 188 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 MPPED1O15442 326 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 S1PR2O95136 353 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 NDUFB6O95139 128 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 NDUFB8O95169 186 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 HPRT1P00492 218 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 HRASP01112 189 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 HNRNPCP07910 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 IGHV4-30-4P0DP06 118 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 HLA-GP17693 338 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 TAS2R46P59540 309 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 FXYD4P59646 89 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 OR2B8PP59922 312 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 RPL8P62917 257 aaKnown RBP10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 ATP5G2Q06055 141 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 RPEL1Q2QD12 228 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 RNASE10Q5GAN6 216 aaKnown RBP10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 TMEM17Q86X19 198 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 PRRT1Q99946 306 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 NEURL2Q9BR09 285 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 RSRP1Q9BUV0 290 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 C20orf85Q9H1P6 137 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 EHFQ9NZC4 300 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 SCP2D1Q9UJQ7 156 aa10.6□□□□□ -0.71
PDLIM7-211ENST00000504318 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 PPP5D1E7EU14 171 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 UPK2O00526 184 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 ACTL6BO94805 426 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 PMP2P02689 132 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 CD3DP04234 171 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 CCR6P51684 374 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 ZNF585BQ52M93 769 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 SLC25A42Q86VD7 318 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 SLC25A21Q9BQT8 299 aaPredicted RBP10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 ZNF2Q9BSG1 426 aaPredicted RBP10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 PLEKHA2Q9HB19 425 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 SLC2A8Q9NY64 477 aa10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 DYNC2H1Q8NCM8 4307 aaKnown RBP10.59□□□□□ -0.71
PDLIM7-211ENST00000504318 TRAV6A0A075B6T7 132 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 C7orf66A4D0T2 115 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 PGLYRP1O75594 196 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 HLA-AP01891 365 aaKnown RBP10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 IFNA6P05013 189 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 NQO2P16083 231 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 CATR1Q13166 79 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 OR51H1Q8NH63 302 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 ZNF414Q96IQ9 312 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 RCHY1Q96PM5 261 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 GPN1Q9HCN4 374 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 TMEM140Q9NV12 185 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 COMMD9Q9P000 198 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 FBXL7Q9UJT9 491 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 ALG5Q9Y673 324 aa10.58□□□□□ -0.72
PDLIM7-211ENST00000504318 A0A0B4J293 547 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms