RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CDCP2Q5VXM1 449 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SPINK14Q6IE38 97 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 DHRS13Q6UX07 377 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 DOLPP1Q86YN1 238 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SGMS2Q8NHU3 365 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 NEIL1Q96FI4 390 aaPredicted RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 GABRG3Q99928 467 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 PECRQ9BY49 303 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM74BQ9NUR3 256 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 BET1LQ9NYM9 111 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SPTBN4Q9H254 2564 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TRBV24-1A0A075B6N3 115 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 A0A1B0GW64 132 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 F5H697 171 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 H3BTX0 84 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 J3QR06 171 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 J3QR89 54 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 M0R2Z0 102 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 MLNRO43193 412 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SRIP30626 198 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SUB1P53999 127 aaKnown RBP eCLIP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 GNG3P63215 75 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 EWSR1Q01844 656 aaKnown RBP eCLIP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SMAGPQ0VAQ4 97 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 GABRA6Q16445 453 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM183BQ1AE95 376 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 DEFB109BQ30KR1 87 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM256Q8N2U0 113 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM178AQ8NBL3 297 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR10G8Q8NGN5 311 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR4A5Q8NH83 315 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 KIR2DL5BQ8NHK3 375 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OCC1Q8TAD7 63 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 RND1Q92730 232 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 RAB37Q96AX2 223 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 RARRES2Q99969 163 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TNFRSF19Q9NS68 423 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 GPR132Q9UNW8 380 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TIMM9Q9Y5J7 89 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 MALRD1Q5VYJ5 2156 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 LAMA5O15230 3695 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 A0A1W2PRS3 328 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM213A2RRL7 107 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 GRIFINA4D1Z8 144 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 LRRC30A6NM36 301 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 ZNF785A8K8V0 405 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 PIN1P1O15428 100 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 PPYP01298 95 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 CRYGBP07316 175 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 CCL4P13236 92 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 ACP1P24666 158 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 RPL8P62917 257 aaKnown RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 UBE2L3P68036 154 aaKnown RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 AESQ08117 197 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 RTL8BQ17RB0 113 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 LRRC10Q5BKY1 277 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 ARTNQ5T4W7 220 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM211Q6ICI0 200 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR8I2Q8N0Y5 310 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 DEFB125Q8N687 156 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 TCTEX1D1Q8N7M0 179 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR8A1Q8NGG7 326 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR10S1Q8NGN2 331 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR10D3Q8NH80 312 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR2T6Q8NHC8 308 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 MRPL30Q8TCC3 161 aaKnown RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 CIB3Q96Q77 187 aaPredicted RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 OR4C12Q96R67 309 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 HSPB9Q9BQS6 159 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 LINC00470Q9BZP3 86 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 KLK13Q9UKR3 277 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 ASPMQ8IZT6 3477 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 NCOA6Q14686 2063 aaPredicted RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 THADAQ6YHU6 1953 aa3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 PHF3Q92576 2039 aaKnown RBP3.1□□□□□ -1.91
PCDH11X-208ENST00000504220 DUXBA0A1W2PPF3 345 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 SLC22A20A6NK97 555 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 LMO7DNF2Z398 122 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 VENTXO95231 258 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 PFN1P07737 140 aaKnown RBP3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 WNT2P09544 360 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 MFAP2P55001 183 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 HLA-DRB5Q30154 266 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 Q5XG85 94 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 SSX8Q7RTT4 187 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 SLC22A18ASQ8N1D0 253 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 TMEM251Q8N6I4 163 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 PRSS33Q8NF86 280 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 OR5AU1Q8NGC0 362 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 APOBEC4Q8WW27 367 aaKnown RBP3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 TAAR3PQ9P1P4 343 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 MGAQ8IWI9 3026 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 A0A087WV48 116 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 IGHV3-72A0A0B4J1Y9 119 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 TRGV8A0A0C4DH27 118 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 IGHV3-35A0A0C4DH35 117 aa3.09□□□□□ -1.91
PCDH11X-208ENST00000504220 NDUFB4O95168 129 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms