RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR13C7P0DN81 318 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 PTBP1P26599 531 aaKnown RBP eCLIP9.04□□□□□ -0.966e-8■□□□□ 8.1
MED28-203ENST00000503945 HRH1P35367 487 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 CD81P60033 236 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 ZFAND6Q6FIF0 208 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 THOC7Q6I9Y2 204 aaKnown RBP9.04□□□□□ -0.96
MED28-203ENST00000503945 SLC25A24Q6NUK1 477 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 MZT2AQ6P582 158 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 PLET1Q6UQ28 207 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 OR1L8Q8NGR8 309 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 FCAMRQ8WWV6 532 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 NEURL2Q9BR09 285 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 SCPEP1Q9HB40 452 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 FKBP11Q9NYL4 201 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 ANAPC10Q9UM13 185 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 IGLC7A0M8Q6 106 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 CGB1A6NKQ9 187 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 MARCH11A6NNE9 402 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 RLN1P04808 185 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 EIF4EP06730 217 aaKnown RBP9.03□□□□□ -0.96
MED28-203ENST00000503945 SERPINE2P07093 398 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 VBP1P61758 197 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 NCS1P62166 190 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 ANKRD55Q3KP44 614 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 ZNF57Q68EA5 555 aaPredicted RBP9.03□□□□□ -0.96
MED28-203ENST00000503945 CADM3Q8N126 398 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 UXS1Q8NBZ7 420 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 OR10W1Q8NGF6 305 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 VN1R17PQ8TDU5 208 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 GPX8Q8TED1 209 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 CCDC140Q96MF4 163 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 HINT2Q9BX68 163 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 OR51B2Q9Y5P1 312 aa9.03□□□□□ -0.96
MED28-203ENST00000503945 OR11H12B2RN74 326 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 FAM25AB3EWG3 89 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 FAM25CB3EWG5 89 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 FAM25GB3EWG6 89 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 ELK1P19419 428 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 G6PCP35575 357 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 TM4SF20Q53R12 229 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 RBPMS2Q6ZRY4 209 aaKnown RBP9.02□□□□□ -0.97
MED28-203ENST00000503945 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 SNX29P2Q8IUI4 249 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 OR1L6Q8NGR2 347 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 ZNF502Q8TBZ5 544 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 TMEM56Q96MV1 263 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 TSC22D3Q99576 134 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 PLEKHA3Q9HB20 300 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 ZC4H2Q9NQZ6 224 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 NDUFA4L2Q9NRX3 87 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.97
MED28-203ENST00000503945 PRNDQ9UKY0 176 aa9.02□□□□□ -0.97
MED28-203ENST00000503945 MFSD2BA6NFX1 497 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 HPGDSO60760 199 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 CD7P09564 240 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 GPR183P32249 361 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 UCP3P55916 312 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 ZNF585BQ52M93 769 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 PHLDA2Q53GA4 152 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 SLC38A6Q8IZM9 456 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 DEFB125Q8N687 156 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 GDPD1Q8N9F7 314 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 OR4A16Q8NH70 328 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 AP3S1Q92572 193 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 LSM10Q969L4 123 aaKnown RBP9.01□□□□□ -0.97
MED28-203ENST00000503945 MARC2Q969Z3 335 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 ISOC1Q96CN7 298 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 WDR89Q96FK6 387 aaPredicted RBP9.01□□□□□ -0.97
MED28-203ENST00000503945 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
MED28-203ENST00000503945 NSG2Q9Y328 171 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 UFC1Q9Y3C8 167 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 CEPT1Q9Y6K0 416 aa9.01□□□□□ -0.97
MED28-203ENST00000503945 ZNF182P17025 639 aaPredicted RBP9□□□□□ -0.97
MED28-203ENST00000503945 EDN2P20800 178 aa9□□□□□ -0.97
MED28-203ENST00000503945 RCVRNP35243 200 aa9□□□□□ -0.97
MED28-203ENST00000503945 ELLP55199 621 aaPredicted RBP9□□□□□ -0.97
MED28-203ENST00000503945 WT1-ASQ06250 92 aa9□□□□□ -0.97
MED28-203ENST00000503945 LINC00322Q6ZN03 302 aaPredicted RBP9□□□□□ -0.97
MED28-203ENST00000503945 H2BFWTQ7Z2G1 175 aa9□□□□□ -0.97
MED28-203ENST00000503945 TBC1D26Q86UD7 250 aa9□□□□□ -0.97
MED28-203ENST00000503945 OR52B4Q8NGK2 314 aa9□□□□□ -0.97
MED28-203ENST00000503945 OR5B3Q8NH48 314 aa9□□□□□ -0.97
MED28-203ENST00000503945 C15orf40Q8WUR7 153 aa9□□□□□ -0.97
MED28-203ENST00000503945 TRAV25A0A0B4J276 109 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 IGHV3-35A0A0C4DH35 117 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 TMEM213A2RRL7 107 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 OR2T8A6NH00 312 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 A8MWP6 167 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 TGOLN2O43493 480 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 SCAF4O95104 1147 aaKnown RBP8.99□□□□□ -0.97
MED28-203ENST00000503945 C8orf88P0DMB2 117 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 LAMTOR1Q6IAA8 161 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 SPSB3Q6PJ21 355 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 UNQ9165/PRO28630Q6UXU0 137 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 SCARB1Q8WTV0 552 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 CACNG8Q8WXS5 425 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 BSCL2Q96G97 398 aaPredicted RBP8.99□□□□□ -0.97
MED28-203ENST00000503945 ATP6V0BQ99437 205 aa8.99□□□□□ -0.97
MED28-203ENST00000503945 SRD5A3Q9H8P0 318 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms