RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CHST8Q9H2A9 424 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 IKZF5Q9H5V7 419 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 RLIMQ9NVW2 624 aa5.45□□□□□ -1.54
CLCN3-203ENST00000502998 SHROOM3Q8TF72 1996 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 ZC3H12DA2A288 527 aaKnown RBP5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PRSS29PA6NIE9 313 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 LRRC3CA6NJW4 275 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 GGTLC3B5MD39 225 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 SH2D1BO14796 132 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PITX3O75364 302 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 CRLF1O75462 422 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 KLF7O75840 302 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-203ENST00000502998 STK17BO94768 372 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 CT62P0C5K7 136 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PRSS3P35030 304 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PPP1CCP36873 323 aaKnown RBP5.44□□□□□ -1.54
CLCN3-203ENST00000502998 APOBEC1P41238 236 aaKnown RBP5.44□□□□□ -1.54
CLCN3-203ENST00000502998 ASIPP42127 132 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 TNFRSF4P43489 277 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 CCL11P51671 97 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 SGSHP51688 502 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 RBM11P57052 281 aaKnown RBP5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PPP1CBP62140 327 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 RAE1P78406 368 aaKnown RBP5.44□□□□□ -1.54
CLCN3-203ENST00000502998 TGFBR3Q03167 851 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 FAM53BQ14153 422 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 DIAPH2-AS1Q14236 149 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PCOLCEQ15113 449 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 CT83Q5H943 113 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 ENTPD8Q5MY95 495 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PRR31Q5SQ13 230 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 FBXL22Q6P050 247 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 TRIM40Q6P9F5 258 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 FAM214BQ7L5A3 538 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 MRGPREQ86SM8 312 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 GATD1Q8NB37 220 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 OR11H6Q8NGC7 330 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 OR5D14Q8NGL3 314 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 OR2I1PQ8NGU4 316 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 CLDND2Q8NHS1 167 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 FAM213BQ8TBF2 198 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 NUP205Q92621 2012 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 KCNS1Q96KK3 526 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 LINC00477Q96M19 166 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 MCEEQ96PE7 176 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 ATP5SQ99766 215 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 DEC1Q9P2X7 70 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 PROCRQ9UNN8 238 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 KLHDC2Q9Y2U9 406 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 ADAMTS20P59510 1910 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 MGAQ8IWI9 3026 aa5.44□□□□□ -1.54
CLCN3-203ENST00000502998 NOTCH2Q04721 2471 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 SPTAN1Q13813 2472 aaKnown RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 C5orf49A4QMS7 147 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 CGB1A6NKQ9 187 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 LRRC30A6NM36 301 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 H3BMG7 143 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 SYS1-DBNDD2H3BUS1 97 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 TGFBR3LH3BV60 316 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 CDX4O14627 284 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 ZNF737O75373 536 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 NDUFA7O95182 113 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 IGLC6P0CF74 106 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 MYOD1P15172 320 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 RPL35AP18077 110 aaKnown RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 GABRG2P18507 467 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 EDNRAP25101 427 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 IL3RAP26951 378 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 CD38P28907 300 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 PRDX3P30048 256 aaKnown RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 NTF4P34130 210 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 ACVRL1P37023 503 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 IER3P46695 156 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 TIAL1Q01085 375 aaKnown RBP eCLIP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 ELOCQ15369 112 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 SAMD5Q5TGI4 173 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 RFLNAQ6ZTI6 216 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 GOLT1AQ6ZVE7 132 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 BPIFA4PQ86YQ2 179 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 SGPP2Q8IWX5 399 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 OR2AJ1Q8NGZ0 328 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 OR51H1Q8NH63 302 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 RASL10AQ92737 203 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 PELI1Q96FA3 418 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 BBC3Q96PG8 261 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 ZNF670Q9BS34 389 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 SLC25A39Q9BZJ4 359 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 HEYLQ9NQ87 328 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 C1orf123Q9NWV4 160 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 TNRC6BQ9UPQ9 1833 aaKnown RBP5.43□□□□□ -1.54
CLCN3-203ENST00000502998 MYOFQ9NZM1 2061 aa5.43□□□□□ -1.54
CLCN3-203ENST00000502998 THADAQ6YHU6 1953 aa5.42□□□□□ -1.54
CLCN3-203ENST00000502998 HEATR5AQ86XA9 2040 aa5.42□□□□□ -1.54
CLCN3-203ENST00000502998 TRAV5A0A0B4J249 113 aa5.42□□□□□ -1.54
CLCN3-203ENST00000502998 ZNF324O75467 553 aaPredicted RBP5.42□□□□□ -1.54
CLCN3-203ENST00000502998 STC2O76061 302 aa5.42□□□□□ -1.54
CLCN3-203ENST00000502998 GASTP01350 101 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms