RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ACTL10Q5JWF8 245 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 FAM209BQ5JX69 171 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 FAM78BQ5VT40 261 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 ZCCHC24Q8N2G6 241 aaKnown RBP8.06□□□□□ -1.12
CLIP1-204ENST00000501271 NUP37Q8NFH4 326 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 CORO2AQ92828 525 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 PRDM13Q9H4Q3 707 aa8.06□□□□□ -1.12
CLIP1-204ENST00000501271 A0A0G2JNJ9 132 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 FOXH1O75593 365 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 FCN3O75636 299 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 TYMSP04818 313 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 IRF2P14316 349 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 NDUFB7P17568 137 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 GCHFRP30047 84 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRSS8Q16651 343 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 MOB3BQ86TA1 216 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 OR1P1Q8NH06 330 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 RND1Q92730 232 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 NEUROG1Q92886 237 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 SLC35D1Q9NTN3 355 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 Q9UFV3 132 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 FUT9Q9Y231 359 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 ZFHX2Q9C0A1 2572 aaPredicted RBP8.05□□□□□ -1.12
CLIP1-204ENST00000501271 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 J3QR06 171 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 UPK2O00526 184 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 CD99P14209 185 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 HIST1H1BP16401 226 aaKnown RBP8.05□□□□□ -1.12
CLIP1-204ENST00000501271 IL3RAP26951 378 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 RPL29P47914 159 aaKnown RBP8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRR20EP86478 221 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRR20CP86479 221 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRR20DP86480 221 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRR20BP86481 221 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRR20AP86496 221 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRCDQ00LT1 54 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 TCF15Q12870 199 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 KRTCAP3Q53RY4 240 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 C9orf152Q5JTZ5 239 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 KCNIP4Q6PIL6 250 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 WFDC8Q8IUA0 241 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PLEKHA3Q9HB20 300 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 PRNDQ9UKY0 176 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 ARFGEF3Q5TH69 2177 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 ACACAQ13085 2346 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 DCHS1Q96JQ0 3298 aa8.05□□□□□ -1.12
CLIP1-204ENST00000501271 AMBPP02760 352 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 HNF1AP20823 631 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 RHOBP62745 196 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 ADIPOQQ15848 244 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 TMEM108Q6UXF1 575 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 TMEM144Q7Z5S9 345 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 SFRP2Q96HF1 295 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 PFDN5Q99471 154 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 TXNDC17Q9BRA2 123 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 ZNF257Q9Y2Q1 563 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 LINC00312Q9Y6C7 94 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 IGKV1OR2-108A0A075B7D4 117 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 hADV38S2A0JD32 116 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 DPRXA6NFQ7 191 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 LINC00869P0C866 280 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 SAA1P0DJI8 122 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-204ENST00000501271 CCL3L1P16619 93 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 GAMTQ14353 236 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 RTL8BQ17RB0 113 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 COA6Q5JTJ3 125 aaKnown RBP8.04□□□□□ -1.12
CLIP1-204ENST00000501271 MIR17HGQ75NE6 70 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 DOLPP1Q86YN1 238 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 CISD2Q8N5K1 135 aaKnown RBP8.04□□□□□ -1.12
CLIP1-204ENST00000501271 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 TMEM37Q8WXS4 190 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 MRPL20Q9BYC9 149 aaKnown RBP8.04□□□□□ -1.12
CLIP1-204ENST00000501271 SLC25A10Q9UBX3 287 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-204ENST00000501271 PIEZO2Q9H5I5 2752 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 GVINP1Q7Z2Y8 2422 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 PKDREJQ9NTG1 2253 aa8.04□□□□□ -1.12
CLIP1-204ENST00000501271 TEX50A0A1B0GTY4 177 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 NKX6-3A6NJ46 265 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 C17orf100A8MU93 164 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 ACTL6BO94805 426 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 THBDP07204 575 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 OR4A8P0C604 315 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 RPL31P62899 125 aaKnown RBP8.03□□□□□ -1.12
CLIP1-204ENST00000501271 LCN2P80188 198 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 BSPH1Q075Z2 132 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 RAB31Q13636 194 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 TMEM30BQ3MIR4 351 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 ZNF833PQ6ZTB9 187 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 LRFN3Q9BTN0 628 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 TP53TG5Q9Y2B4 290 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 MDFIC2A0A1B0GVS7 189 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 C16orf97H3BN30 126 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 TNFRSF1AP19438 455 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 PDLIM4P50479 330 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 TDGF1P3P51864 188 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 RPL15P61313 204 aaKnown RBP8.03□□□□□ -1.12
CLIP1-204ENST00000501271 OR10W1Q8NGF6 305 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 ACY3Q96HD9 319 aa8.03□□□□□ -1.12
CLIP1-204ENST00000501271 SH3BGRL2Q9UJC5 107 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms