RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 PAFAH1B2P68402 229 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 PDLIM3Q53GG5 364 aaPredicted RBP13.51□□□□□ -0.25
COL6A1-206ENST00000498614 ABHD17AQ96GS6 310 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 MIEN1Q9BRT3 115 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 IL36BQ9NZH7 164 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 PAM16Q9Y3D7 125 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 RELNP78509 3460 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 M0QZK8 103 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 FCGR3BO75015 233 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 MPDU1O75352 247 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 IGHV3-13P01766 116 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 IGHV3-7P01780 117 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 SPRNQ5BIV9 151 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 Q8TCH9 128 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 TUBG2Q9NRH3 451 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 SLC25A15Q9Y619 301 aa13.51□□□□□ -0.25
COL6A1-206ENST00000498614 IGKV1D-17A0A075B6S4 117 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 PROP1O75360 226 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 ESDP10768 282 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 PRAMEF5Q5TYX0 476 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 SPATA31B1PQ5VZV4 182 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 OR1L6Q8NGR2 347 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 SSMEM1Q8WWF3 244 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 FAM234AQ9H0X4 552 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 HEYLQ9NQ87 328 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-206ENST00000498614 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 RPL31P62899 125 aaKnown RBP13.5□□□□□ -0.25
COL6A1-206ENST00000498614 KRTCAP3Q53RY4 240 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 ABHD12Q8N2K0 398 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 VN1R17PQ8TDU5 208 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 C1orf159Q96HA4 380 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 GNG12Q9UBI6 72 aa13.5□□□□□ -0.25
COL6A1-206ENST00000498614 M0R1B8 84 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 DLEU1O43261 78 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 VDAC2P45880 294 aaPredicted RBP13.49□□□□□ -0.25
COL6A1-206ENST00000498614 GPR12P47775 334 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 TBR1Q16650 682 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 AARDQ4LEZ3 155 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 CHODLQ9H9P2 273 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 RNF114Q9Y508 228 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 TRAV3A0A0B4J244 114 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 SRRM5B3KS81 715 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 ADH4P08319 380 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 NPSP0C0P6 89 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 GCHFRP30047 84 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 DUTP33316 252 aaKnown RBP13.49□□□□□ -0.25
COL6A1-206ENST00000498614 IER3P46695 156 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 LGALS4P56470 323 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 HTD2P86397 168 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 VHLLQ6RSH7 139 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 BAGE3Q86Y29 109 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 BAGE2Q86Y30 109 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 RPRMLQ8N4K4 120 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 OR4A16Q8NH70 328 aa13.49□□□□□ -0.25
COL6A1-206ENST00000498614 FOXH1O75593 365 aa13.48□□□□□ -0.25
COL6A1-206ENST00000498614 FAM87AP0C7U9 286 aa13.48□□□□□ -0.25
COL6A1-206ENST00000498614 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
COL6A1-206ENST00000498614 ZADH2Q8N4Q0 377 aa13.48□□□□□ -0.25
COL6A1-206ENST00000498614 GCSAMQ8N6F7 178 aa13.48□□□□□ -0.25
COL6A1-206ENST00000498614 ZNRF1Q8ND25 227 aa13.48□□□□□ -0.25
COL6A1-206ENST00000498614 SEPSECSQ9HD40 501 aaKnown RBP13.48□□□□□ -0.25
COL6A1-206ENST00000498614 FCN1O00602 326 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 TMEM183BQ1AE95 376 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 TRAT1Q6PIZ9 186 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MOGAT3Q86VF5 341 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 OR2V2Q96R30 315 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 GOLT1BQ9Y3E0 138 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 CADP27708 2225 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 ATRXP46100 2492 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 TRAV9-1A0A075B6T8 112 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MBD3L4A6NDZ8 208 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MBD3L5A6NJ08 208 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 BRS3P32247 399 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 TMPRSS3P57727 454 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MZT1Q08AG7 82 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 OR5I1Q13606 314 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MORN2Q502X0 79 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 RPL39P5Q59GN2 51 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MRPL52Q86TS9 123 aaKnown RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
COL6A1-206ENST00000498614 SAMD10Q9BYL1 202 aa13.47□□□□□ -0.25
COL6A1-206ENST00000498614 SNURFLB1AK76 121 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 SPRY3O43610 288 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 BATFQ16520 125 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 FAM201AQ5SY85 155 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 RBMXL3Q8N7X1 1067 aaKnown RBP13.46□□□□□ -0.25
COL6A1-206ENST00000498614 LSM4Q9Y4Z0 139 aaKnown RBP13.46□□□□□ -0.25
COL6A1-206ENST00000498614 HCFC1P51610 2035 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 TLN1Q9Y490 2541 aaKnown RBP13.46□□□□□ -0.25
COL6A1-206ENST00000498614 M0R1X1 148 aa13.46□□□□□ -0.25
COL6A1-206ENST00000498614 EFNB3Q15768 340 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms