RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR10C1Q96KK4 312 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 C19orf24Q9BVV8 132 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 MED28Q9H204 178 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 ENY2Q9NPA8 101 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 COA4Q9NYJ1 87 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 GSKIPQ9P0R6 139 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 ZNF257Q9Y2Q1 563 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 RNF114Q9Y508 228 aa10.68□□□□□ -0.7
CPNE1-227ENST00000498056 CGB1A6NKQ9 187 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 CEBPZOSA8MTT3 80 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 HAX1O00165 279 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 WRBO00258 174 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 EGR2P11161 476 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-227ENST00000498056 SLC25A6P12236 298 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 CRIP2P52943 208 aaPredicted RBP10.67□□□□□ -0.7
CPNE1-227ENST00000498056 HSPE1P61604 102 aaKnown RBP10.67□□□□□ -0.7
CPNE1-227ENST00000498056 SLC35B1P78383 322 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 MRPL41Q8IXM3 137 aaKnown RBP10.67□□□□□ -0.7
CPNE1-227ENST00000498056 OR10W1Q8NGF6 305 aa10.67□□□□□ -0.7
CPNE1-227ENST00000498056 IGLC7A0M8Q6 106 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 CLPSL1A2RUU4 121 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 S100A10P60903 97 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 SPCS3P61009 180 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 RRAS2P62070 204 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-227ENST00000498056 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 TMEM267Q0VDI3 215 aaPredicted RBP10.66□□□□□ -0.7
CPNE1-227ENST00000498056 FOXL1Q12952 345 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 FCN2Q15485 313 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 ASPHD1Q5U4P2 390 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 C11orf87Q6NUJ2 197 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 C10orf99Q6UWK7 81 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 C19orf35Q6ZS72 473 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 ZNF329Q86UD4 541 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 OR4D5Q8NGN0 318 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 C2orf50Q96LR7 162 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 GON7Q9BXV9 100 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 MAGT1Q9H0U3 335 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 NDUFA4L2Q9NRX3 87 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 HSPB7Q9UBY9 170 aa10.66□□□□□ -0.7
CPNE1-227ENST00000498056 PITX3O75364 302 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 OR13C7P0DN81 318 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 IAPPP10997 89 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 NKX2-1P43699 371 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-227ENST00000498056 DEFA5Q01523 94 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 AARDQ4LEZ3 155 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 AWAT1Q58HT5 328 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 CXorf66Q5JRM2 361 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-227ENST00000498056 KHDC1LQ5JSQ8 128 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 CENPVQ7Z7K6 275 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-227ENST00000498056 OR5T1Q8NG75 326 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 OR52E5Q8NH55 327 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 FAM110DQ8TAY7 271 aaPredicted RBP10.65□□□□□ -0.7
CPNE1-227ENST00000498056 DTD1Q8TEA8 209 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 TMEM158Q8WZ71 300 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 RBKSQ9H477 322 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 ZNF355PQ9NSJ1 428 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 CACFD1Q9UGQ2 172 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 ZNF580Q9UK33 172 aa10.65□□□□□ -0.7
CPNE1-227ENST00000498056 LSM5Q9Y4Y9 91 aaKnown RBP10.65□□□□□ -0.7
CPNE1-227ENST00000498056 ATRQ13535 2644 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 A0A1B0GUS0 222 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 TMEM89A2RUT3 159 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 FAM90A26D6RGX4 464 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 SSSCA1O60232 199 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 MED6O75586 246 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 PF4V1P10720 104 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 H2BFSP57053 126 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 PROK1P58294 105 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 WT1-ASQ06250 92 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 LRRC37A5PQ49AS3 106 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 AKIRIN2Q53H80 203 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 C19orf54Q5BKX5 351 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 Q6ZNX1 250 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 HSD17B13Q7Z5P4 300 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-227ENST00000498056 OR11H7Q8NGC8 314 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 OR4X2Q8NGF9 303 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 SRSF8Q9BRL6 282 aaKnown RBP10.64□□□□□ -0.71
CPNE1-227ENST00000498056 WNT10AQ9GZT5 417 aa10.64□□□□□ -0.71
CPNE1-227ENST00000498056 HEYLQ9NQ87 328 aaPredicted RBP10.64□□□□□ -0.71
CPNE1-227ENST00000498056 NPIPB5A8MRT5 1133 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 SOX15O60248 233 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 FBXO24O75426 580 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 PRH1P02810 166 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 DEFA4P12838 97 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 CXCL3P19876 107 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 PSMB6P28072 239 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 POLR2GP62487 172 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPNE1-227ENST00000498056 CFHR3Q02985 330 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 TMEM68Q96MH6 324 aa10.63□□□□□ -0.71
CPNE1-227ENST00000498056 RCL1Q9Y2P8 373 aaKnown RBP10.63□□□□□ -0.71
CPNE1-227ENST00000498056 H3BP45 60 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 SYNGR2O43760 224 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 MBPP02686 304 aaPredicted RBP10.62□□□□□ -0.71
CPNE1-227ENST00000498056 CTRB1P17538 263 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 SNCAP37840 140 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 TPPP2P59282 170 aa10.62□□□□□ -0.71
CPNE1-227ENST00000498056 ERHP84090 104 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms