RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 UCP1P25874 307 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 G6PCP35575 357 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 INSL3P51460 131 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 OR4A47Q6IF82 309 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 PUSL1Q8N0Z8 303 aaKnown RBP11.85□□□□□ -0.51
NUP50-219ENST00000497960 RNASE11Q8TAA1 199 aaKnown RBP11.85□□□□□ -0.51
NUP50-219ENST00000497960 TMEM222Q9H0R3 208 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
NUP50-219ENST00000497960 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 A0A087WW49 117 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 ATG12O94817 140 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 KRASP01116 189 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 TCRBP04435 133 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 SLURP1P55000 103 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 DHODHQ02127 395 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 POU2AF1Q16633 256 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 TMEM128Q5BJH2 165 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 MMD2Q8IY49 270 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 OR4A5Q8NH83 315 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
NUP50-219ENST00000497960 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
NUP50-219ENST00000497960 ZNF430Q9H8G1 570 aaPredicted RBP11.84□□□□□ -0.51
NUP50-219ENST00000497960 NUDT15Q9NV35 164 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 COA4Q9NYJ1 87 aa11.84□□□□□ -0.51
NUP50-219ENST00000497960 TRAV6A0A075B6T7 132 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 ANXA7P20073 488 aaKnown RBP11.83□□□□□ -0.52
NUP50-219ENST00000497960 UBE2MP61081 183 aaKnown RBP11.83□□□□□ -0.52
NUP50-219ENST00000497960 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
NUP50-219ENST00000497960 PPP1R1AQ13522 171 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 H2BFWTQ7Z2G1 175 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 ZNF429Q86V71 674 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 SLC25A42Q86VD7 318 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 TMEM167AQ8TBQ9 72 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 RBPMSQ93062 196 aaKnown RBP11.83□□□□□ -0.52
NUP50-219ENST00000497960 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 SPIN2AQ99865 258 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 SPIN2BQ9BPZ2 258 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 RANGRFQ9HD47 186 aaPredicted RBP11.83□□□□□ -0.52
NUP50-219ENST00000497960 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
NUP50-219ENST00000497960 SAP30O75446 220 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 BRI3O95415 125 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 HLA-AP01891 365 aaKnown RBP11.82□□□□□ -0.52
NUP50-219ENST00000497960 OR9G9P0C7N8 305 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 APELAP0DMC3 54 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
NUP50-219ENST00000497960 SRPXP78539 464 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 TMEM187Q14656 261 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 C4orf46Q504U0 113 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 TMEM268Q5VZI3 342 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 GLYATL2Q8WU03 294 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 RRNAD1Q96FB5 475 aaKnown RBP11.82□□□□□ -0.52
NUP50-219ENST00000497960 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
NUP50-219ENST00000497960 UPK2O00526 184 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 SNAPC5O75971 98 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 SFT2D2O95562 160 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 H2AFB2P0C5Z0 115 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 ZP3P21754 424 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 OR2B8PP59922 312 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 C10orf55Q5SWW7 151 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 LGI3Q8N145 548 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 LHFPL5Q8TAF8 219 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 USMG5Q96IX5 58 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 PRR25Q96S07 402 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
NUP50-219ENST00000497960 ZNF256Q9Y2P7 627 aaPredicted RBP11.81□□□□□ -0.52
NUP50-219ENST00000497960 TRAV3A0A0B4J244 114 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 ANKRD34BA5PLL1 514 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 RBMXL2O75526 392 aaKnown RBP11.8□□□□□ -0.52
NUP50-219ENST00000497960 CDS2O95674 445 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 LY86O95711 162 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 IGKV1-5P01602 117 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 OR4E1P0C645 316 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 HLA-GP17693 338 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 MAS1LP35410 378 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 RPL27AP46776 148 aaKnown RBP11.8□□□□□ -0.52
NUP50-219ENST00000497960 CD69Q07108 199 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 PLET1Q6UQ28 207 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 NRARPQ7Z6K4 114 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 LYG2Q86SG7 212 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 SELENOHQ8IZQ5 122 aaKnown RBP11.8□□□□□ -0.52
NUP50-219ENST00000497960 SLC35G3Q8N808 338 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 OR4C12Q96R67 309 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 ELOVL1Q9BW60 279 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 NSG2Q9Y328 171 aa11.8□□□□□ -0.52
NUP50-219ENST00000497960 C9orf170A2RU37 121 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 C15orf61A6NNL5 157 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 DHRS2Q13268 280 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 TMEM56Q96MV1 263 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 B9D2Q9BPU9 175 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 COMMD5Q9GZQ3 224 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 PRNDQ9UKY0 176 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 TMEM56-RWDD3S4R434 201 aa11.79□□□□□ -0.52
NUP50-219ENST00000497960 DNAH3Q8TD57 4116 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms