RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 HES3Q5TGS1 186 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 OR1N2Q8NGR9 330 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 GGTLC1Q9BX51 225 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 ZNF391Q9UJN7 358 aa10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
GAPVD1-220ENST00000497580 IGHV1OR15-9A0A0B4J2B8 117 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 LMO7DNF2Z398 122 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 MIR17HGQ75NE6 70 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM168AQ92567 244 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 TMEM70Q9BUB7 260 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 ANKRD30BLA7E2S9 258 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 FABP6P51161 128 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 MRPL49Q13405 166 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 ZNF718Q3SXZ3 478 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 OR1B1Q8NGR6 318 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 RAB37Q96AX2 223 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 KCNIP1Q9NZI2 227 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 ZNF318Q5VUA4 2279 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 MED12LQ86YW9 2145 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 RHOBP62745 196 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 NANOS1Q8WY41 292 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 SPSB4Q96A44 273 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 SGK494Q96LW2 274 aa10.87□□□□□ -0.67
GAPVD1-220ENST00000497580 SAA2-SAA4A0A096LPE2 208 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 H0YJW9 148 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 OR2H2O95918 312 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 Q8N7P7 452 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 HSD17B10Q99714 261 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 RARRES3Q9UL19 164 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 CHCHD2Q9Y6H1 151 aaPredicted RBP10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 C7orf71A4D174 169 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 FBLL1A6NHQ2 334 aaKnown RBP10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 EFNB3Q15768 340 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 C12orf54Q6X4T0 127 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 CPT1CQ8TCG5 803 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 LINC00479Q96M42 142 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 FCGR3BO75015 233 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 CD27P26842 260 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 SRSF7Q16629 238 aaKnown RBP eCLIP10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 SMIM21Q3B7S5 101 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 DEFB125Q8N687 156 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 OR4A16Q8NH70 328 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 TNFRSF19Q9NS68 423 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 PSG11Q9UQ72 335 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 HILPDAQ9Y5L2 63 aa10.86□□□□□ -0.67
GAPVD1-220ENST00000497580 RPL24P83731 157 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 TRIP6Q15654 476 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 GUSBP11Q6P575 273 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 GJE1A6NN92 205 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 FOXG1P55316 489 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 RAB1CQ92928 201 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 PHF7Q9BWX1 381 aaPredicted RBP10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 PEF1Q9UBV8 284 aaKnown RBP10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 TRGV10A0A0A0MS01 117 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 FAM231BA6NCW3 169 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 CSN3P07498 182 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 ZNF137PP52743 207 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 C16orf54Q6UWD8 224 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 FADS6Q8N9I5 356 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 SCCPDHQ8NBX0 429 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 C5orf30Q96GV9 206 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
GAPVD1-220ENST00000497580 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 GRPP07492 148 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 OPRK1P41145 380 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 CCR5P51681 352 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 ZNF645Q8N7E2 425 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 GALMQ96C23 342 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 PRRG4Q9BZD6 226 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 SAP30LQ9HAJ7 183 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 H3BUT2 72 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 SLC25A45Q8N413 288 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 OR52E5Q8NH55 327 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 C9JCJ5 164 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 CLDN18P56856 261 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 GNG3P63215 75 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 LHFPL4Q7Z7J7 247 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 TRIB1Q96RU8 372 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 C1QTNF5Q9BXJ0 243 aa10.84□□□□□ -0.67
GAPVD1-220ENST00000497580 ABCA1O95477 2261 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 IGLV3-32A0A0A0MS00 114 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 C2orf70A6NJV1 201 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 LINC00473A8K010 186 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 LIFP15018 202 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 ZNF138P52744 262 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 AESQ08117 197 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 SAMD13Q5VXD3 122 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 TMEM251Q8N6I4 163 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 MRPL27Q9P0M9 148 aaKnown RBP10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 CDIPTO14735 213 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 LEPROTL1O95214 131 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 FAM71F2Q6NXP2 309 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 GTSF1LQ9H1H1 148 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 HAND1O96004 215 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 CFIP05156 583 aa10.83□□□□□ -0.68
GAPVD1-220ENST00000497580 IGFBP2P18065 325 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms