RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ANK1P16157 1881 aa4.15□□□□□ -1.75
BRCA1-224ENST00000497488 TRIP11Q15643 1979 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 SCN2AQ99250 2005 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 PIKFYVEQ9Y2I7 2098 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 BRWD1Q9NSI6 2320 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 IGHV1-69-2A0A0G2JMI3 117 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 KPNA4O00629 521 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 HMGB3O15347 200 aaKnown RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 CCL16O15467 120 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 MED6O75586 246 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 CDRT1O95170 752 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 OPN1SWP03999 348 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 HLA-DQB2P05538 268 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 OR10J1P30954 320 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 PHBP35232 272 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 DEFA1P59665 94 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 GNG5P63218 68 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 ELF3P78545 371 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 TNFAIP6P98066 277 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 C12orf74Q32Q52 190 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 PLPPR5Q32ZL2 321 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM128Q5BJH2 165 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 C1orf174Q8IYL3 243 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 UMODL1-AS1Q8N2C9 162 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF664Q8N3J9 261 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 EIF4E3Q8N5X7 224 aaKnown RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 Q8N7P7 452 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 SKA2Q8WVK7 121 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM222Q9H0R3 208 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 ALX4Q9H161 411 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 SH3BGRL3Q9H299 93 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 PRTFDC1Q9NRG1 225 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 LYRM2Q9NU23 88 aaPredicted RBP4.14□□□□□ -1.75
BRCA1-224ENST00000497488 RPS6KB2Q9UBS0 482 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF580Q9UK33 172 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 CITO14578 2027 aa4.14□□□□□ -1.75
BRCA1-224ENST00000497488 MAP1LC3B2A6NCE7 125 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 G3V2T6 193 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 M0QZK8 103 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 OR7C2O60412 319 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 HLA-DQA1P01909 254 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 OR56A5P0C7T3 313 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 C1GALT1C1LP0DN25 315 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 SPI1P17947 270 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 CCR2P41597 374 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 CA7P43166 264 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 TAF6P49848 677 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 NUDT2P50583 147 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 DAPP51397 102 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 GNB2P62879 340 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 SYCNQ0VAF6 134 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 SURF2Q15527 256 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-224ENST00000497488 MMDQ15546 238 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 DCUN1D2Q6PH85 259 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 UNQ9165/PRO28630Q6UXU0 137 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 OR52N1Q8NH53 320 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 OR5W2Q8NH69 310 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 MAL2Q969L2 176 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 VOPP1Q96AW1 172 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 TCEAL4Q96EI5 215 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 RMND5BQ96G75 393 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-224ENST00000497488 NARS2Q96I59 477 aaKnown RBP4.13□□□□□ -1.75
BRCA1-224ENST00000497488 MAP1LC3BQ9GZQ8 125 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 CXorf21Q9HAI6 301 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 LRTM1Q9HBL6 345 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF331Q9NQX6 463 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-224ENST00000497488 OR52A1Q9UKL2 312 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 TCHHQ07283 1943 aa4.13□□□□□ -1.75
BRCA1-224ENST00000497488 SCN1AP35498 2009 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 A0A1W2PP18 115 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-224ENST00000497488 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-224ENST00000497488 CPMP14384 443 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 GZMHP20718 246 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 CCR6P51684 374 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 PSPHP78330 225 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 HTR4Q13639 388 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 PDGFRLQ15198 375 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 FCN2Q15485 313 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 C14orf177Q52M58 125 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 ZNF678Q5SXM1 525 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 LINC01551Q86U37 167 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 BAP18Q8IXM2 172 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 OSR2Q8N2R0 312 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 KRTCAP2Q8N6L1 136 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 FGF13Q92913 245 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 C12orf43Q96C57 262 aaKnown RBP4.12□□□□□ -1.75
BRCA1-224ENST00000497488 ROPN1LQ96C74 230 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 GNPNAT1Q96EK6 184 aaPredicted RBP4.12□□□□□ -1.75
BRCA1-224ENST00000497488 IMMP1LQ96LU5 166 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 CCL13Q99616 98 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 PKMYT1Q99640 499 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 IFI27L2Q9H2X8 130 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 MED29Q9NX70 200 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 TRIOO75962 3097 aa4.12□□□□□ -1.75
BRCA1-224ENST00000497488 NOTCH4Q99466 2003 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 A0A1W2PRE2 83 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 TMEM223A0PJW6 202 aa4.11□□□□□ -1.75
BRCA1-224ENST00000497488 EFCAB10A6NFE3 127 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms