RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 FGF2P09038 288 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 GPR183P32249 361 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 ANKRD55Q3KP44 614 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 GPR141Q7Z602 305 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 OR52B4Q8NGK2 314 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 QTRT1Q9BXR0 403 aaKnown RBP12.87□□□□□ -0.35
SMC4-226ENST00000497311 EHFQ9NZC4 300 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
SMC4-226ENST00000497311 CYB5BO43169 146 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 SCAF4O95104 1147 aaKnown RBP12.86□□□□□ -0.35
SMC4-226ENST00000497311 S1PR2O95136 353 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 PTBP1P26599 531 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMC4-226ENST00000497311 GNRHRP30968 328 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 RORCP51449 518 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 TM4SF20Q53R12 229 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 THOC7Q6I9Y2 204 aaKnown RBP12.86□□□□□ -0.35
SMC4-226ENST00000497311 PLET1Q6UQ28 207 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 BTNL8Q6UX41 500 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 UNQ9165/PRO28630Q6UXU0 137 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 ZNF502Q8TBZ5 544 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 MARC2Q969Z3 335 aa12.86□□□□□ -0.35
SMC4-226ENST00000497311 TRAPPC2P0DI81 140 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 TRAPPC2BP0DI82 140 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 RPA2P15927 270 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 RFX2P48378 723 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 ERVK-16P61578 105 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 ZNF585BQ52M93 769 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 TMEM69Q5SWH9 247 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 DHRS11Q6UWP2 260 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 RBPMS2Q6ZRY4 209 aaKnown RBP12.85□□□□□ -0.35
SMC4-226ENST00000497311 OR10W1Q8NGF6 305 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 CMTM3Q96MX0 182 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 MRPL27Q9P0M9 148 aaKnown RBP12.85□□□□□ -0.35
SMC4-226ENST00000497311 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 UFC1Q9Y3C8 167 aa12.85□□□□□ -0.35
SMC4-226ENST00000497311 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 IGHV3-35A0A0C4DH35 117 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 TEX50A0A1B0GTY4 177 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 APOA1P02647 267 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 RLN1P04808 185 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 EIF4EP06730 217 aaKnown RBP12.84□□□□□ -0.35
SMC4-226ENST00000497311 C8orf88P0DMB2 117 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 OR13C7P0DN81 318 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 F2RP25116 425 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 ELLP55199 621 aaPredicted RBP12.84□□□□□ -0.35
SMC4-226ENST00000497311 SLC25A24Q6NUK1 477 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 HSD17B13Q7Z5P4 300 aaPredicted RBP12.84□□□□□ -0.35
SMC4-226ENST00000497311 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 OR1L8Q8NGR8 309 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 VN1R17PQ8TDU5 208 aa12.84□□□□□ -0.35
SMC4-226ENST00000497311 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
SMC4-226ENST00000497311 HYDINQ4G0P3 5121 aa12.83□□□□□ -0.35
SMC4-226ENST00000497311 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
SMC4-226ENST00000497311 JTBO76095 146 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 PMP2P02689 132 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 SERPINE2P07093 398 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 TAS2R20P59543 309 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 MOB3AQ96BX8 217 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 GGTLC1Q9BX51 225 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
SMC4-226ENST00000497311 ANAPC10Q9UM13 185 aa12.83□□□□□ -0.36
SMC4-226ENST00000497311 LOC102724200A0A096LPH7 203 aaPredicted RBP12.82□□□□□ -0.36
SMC4-226ENST00000497311 TGOLN2O43493 480 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 ZNF182P17025 639 aaPredicted RBP12.82□□□□□ -0.36
SMC4-226ENST00000497311 LPAR6P43657 344 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 TAS2R46P59540 309 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 WT1-ASQ06250 92 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 MZT2AQ6P582 158 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 CMTM1Q8IZ96 169 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 OR1L6Q8NGR2 347 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 OR5H2Q8NGV7 314 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 AP3S1Q92572 193 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 DGCR14Q96DF8 476 aaKnown RBP12.82□□□□□ -0.36
SMC4-226ENST00000497311 HINT2Q9BX68 163 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 NDUFA4L2Q9NRX3 87 aa12.82□□□□□ -0.36
SMC4-226ENST00000497311 EPPK1P58107 5090 aaKnown RBP12.82□□□□□ -0.36
SMC4-226ENST00000497311 SMIM31A0A1B0GVY4 71 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 OR2T8A6NH00 312 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 HPGDSO60760 199 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 SNAPC5O75971 98 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 KRASP01116 189 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 NAT1P18440 290 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 PRSS3P35030 304 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 RPL5P46777 297 aaKnown RBP12.81□□□□□ -0.36
SMC4-226ENST00000497311 SLC38A6Q8IZM9 456 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 OR2C3Q8N628 320 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 OR6F1Q8NGZ6 308 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 FCAMRQ8WWV6 532 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 TMEM190Q8WZ59 177 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
SMC4-226ENST00000497311 BSCL2Q96G97 398 aaPredicted RBP12.81□□□□□ -0.36
SMC4-226ENST00000497311 C5orf66Q9H5L9 145 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 OR51B2Q9Y5P1 312 aa12.81□□□□□ -0.36
SMC4-226ENST00000497311 F11RQ9Y624 299 aaKnown RBP12.81□□□□□ -0.36
SMC4-226ENST00000497311 PLECQ15149 4684 aaKnown RBP12.8□□□□□ -0.36
SMC4-226ENST00000497311 GPR31O00270 319 aa12.8□□□□□ -0.36
SMC4-226ENST00000497311 ELK1P19419 428 aa12.8□□□□□ -0.36
SMC4-226ENST00000497311 G6PCP35575 357 aa12.8□□□□□ -0.36
SMC4-226ENST00000497311 SPSB3Q6PJ21 355 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms