RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 UMAD1C9J7I0 102 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 J3QR06 171 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 MBPP02686 304 aaPredicted RBP8.63□□□□□ -1.03
RNF220-217ENST00000496262 PRH1P02810 166 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 OR5H8P0DN80 308 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 PIGPP57054 158 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 CLINT1Q14677 625 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 RSU1Q15404 277 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 ETV3LQ6ZN32 361 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 C18orf65Q6ZTR6 163 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 C6orf201Q7Z4U5 140 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 MRPL41Q8IXM3 137 aaKnown RBP8.63□□□□□ -1.03
RNF220-217ENST00000496262 LGI3Q8N145 548 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 LRTM2Q8N967 370 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 CCDC71LQ8N9Z2 235 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 OR10X1Q8NGY0 326 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 PLPPR1Q8TBJ4 325 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 EIF5A2Q9GZV4 153 aaKnown RBP8.63□□□□□ -1.03
RNF220-217ENST00000496262 WFDC1Q9HC57 220 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 ZNF581Q9P0T4 197 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 ZMAT5Q9UDW3 170 aaKnown RBP8.63□□□□□ -1.03
RNF220-217ENST00000496262 AK3Q9UIJ7 227 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 HSF4Q9ULV5 492 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 PSG11Q9UQ72 335 aa8.63□□□□□ -1.03
RNF220-217ENST00000496262 RCL1Q9Y2P8 373 aaKnown RBP8.63□□□□□ -1.03
RNF220-217ENST00000496262 IGHV3-72A0A0B4J1Y9 119 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 A0A1W2PPI3 338 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 AP4M1O00189 453 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 IFNA17P01571 189 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 IGKV1D-33P01593 117 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 IGKV1-33P01594 117 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 REG1BP48304 166 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 HERV-K104P61576 105 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 RPL23AP62750 156 aaKnown RBP8.62□□□□□ -1.03
RNF220-217ENST00000496262 FABP9Q0Z7S8 132 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 C8orf86Q6ZUL3 223 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 C5orf56Q8N8D9 126 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 LINC00482Q8N8I6 264 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 UBALD1Q8TB05 177 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 CD300LFQ8TDQ1 290 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 DPF1Q92782 380 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 GALNT14Q96FL9 552 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 BSCL2Q96G97 398 aaPredicted RBP8.62□□□□□ -1.03
RNF220-217ENST00000496262 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 HDHD3Q9BSH5 251 aaPredicted RBP8.62□□□□□ -1.03
RNF220-217ENST00000496262 SCRT1Q9BWW7 348 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 SLC35B3Q9H1N7 401 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 OR51M1Q9H341 326 aa8.62□□□□□ -1.03
RNF220-217ENST00000496262 NCBP2LA6PVI3 153 aaKnown RBP8.61□□□□□ -1.03
RNF220-217ENST00000496262 HSD17B6O14756 317 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 OR7C1O76099 320 aaPredicted RBP8.61□□□□□ -1.03
RNF220-217ENST00000496262 OR5AC1P0C628 307 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 CGB3P0DN86 165 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 CGB7P0DN87 165 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 S100PP25815 95 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 MAS1LP35410 378 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 SULT1A1P50225 295 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 SRPXP78539 464 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 TMEM182Q6ZP80 229 aaPredicted RBP8.61□□□□□ -1.03
RNF220-217ENST00000496262 SLC35E3Q7Z769 313 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 SUMF2Q8NBJ7 301 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 KLHL30-AS1Q8NEE0 82 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 FAM213BQ8TBF2 198 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 NEK7Q8TDX7 302 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 PARP12Q9H0J9 701 aaKnown RBP8.61□□□□□ -1.03
RNF220-217ENST00000496262 SMDT1Q9H4I9 107 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 NIT2Q9NQR4 276 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 GSN-AS1Q9NRJ2 163 aa8.61□□□□□ -1.03
RNF220-217ENST00000496262 KIAA2026Q5HYC2 2103 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 IGHV3-43A0A0B4J1X8 118 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A18PA6NE21 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A16PA6NEW6 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A20PA6NIJ5 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A9PA6NNJ1 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A12PA8MX19 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A5PA8MXJ8 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 ST8SIA3O43173 380 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 PITX3O75364 302 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 CLN5O75503 358 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 OR2C1O95371 312 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 DIRAS3O95661 229 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 OR8U8P0C7N1 319 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A15PP0C7V4 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A13PP0C7W8 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A14PP0C7W9 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM90A24PP0C7X0 464 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 IGHV3-43DP0DP04 118 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 RAB7AP51149 207 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 UCP3P55916 312 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FXYD4P59646 89 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 SLC35B1P78383 322 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 EWSR1Q01844 656 aaKnown RBP eCLIP8.6□□□□□ -1.03
RNF220-217ENST00000496262 CD69Q07108 199 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 FAM209BQ5JX69 171 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 LYZL2Q7Z4W2 148 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 THNSL2Q86YJ6 484 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 HSD17B11Q8NBQ5 300 aa8.6□□□□□ -1.03
RNF220-217ENST00000496262 RTN4IP1Q8WWV3 396 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms