RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 CACNA1BQ00975 2339 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 HPRT1P00492 218 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 IFNA1P01562 189 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 CCL3L1P16619 93 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 LINC00205P59089 165 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 SERF2P84101 59 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 JOSD1Q15040 202 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 WDR25Q64LD2 544 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 OR4X1Q8NH49 305 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 ADTRPQ96IZ2 230 aa15.17■□□□□ 0.02
TSPAN4-212ENST00000494815 CEBPZOSA8MTT3 80 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 SYNGR2O43760 224 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 FCGR3BO75015 233 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 TMEM155Q4W5P6 130 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 LYG1Q8N1E2 194 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 DDB2Q92466 427 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 S1PR3Q99500 378 aa15.16■□□□□ 0.02
TSPAN4-212ENST00000494815 G0S2P27469 103 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 THBS3P49746 956 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 GNG10P50151 68 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 TNFRSF9Q07011 255 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 LRRC75BQ2VPJ9 315 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 TMEM41BQ5BJD5 291 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 H2BFWTQ7Z2G1 175 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 NAT8Q9UHE5 227 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 A0A1W2PPR1 153 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 C19orf84I3L1E1 186 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 FGF7P21781 194 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 ARL16Q0P5N6 197 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 PMS2P11Q13670 270 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 USF2Q15853 346 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 PYGO2Q9BRQ0 406 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 PSENENQ9NZ42 101 aa15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 RALYQ9UKM9 306 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-212ENST00000494815 MAP1LC3B2A6NCE7 125 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 FAM90A9PA6NNJ1 464 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 MDKP21741 143 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 DLX6P56179 175 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 C1orf229Q6ZS94 237 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 C8orf31Q8N9H6 132 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 OR1P1Q8NH06 330 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 PINX1Q96BK5 328 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 R3HDM4Q96D70 268 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 TIMD4Q96H15 378 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 PARD6GQ9BYG4 376 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 MAP1LC3BQ9GZQ8 125 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 HSPB7Q9UBY9 170 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 AMBPP02760 352 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 PFN1P07737 140 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 SNRPCP09234 159 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 METTL15P1P0C7V9 234 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 IAPPP10997 89 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 HBG1P69891 147 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 HBG2P69892 147 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 ZNF841Q6ZN19 808 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 CYP2G1PQ6ZSU1 146 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 HAPLN4Q86UW8 402 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 OR4S2Q8NH73 311 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 RAB1CQ92928 201 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 RBKSQ9H477 322 aa15.14■□□□□ 0.01
TSPAN4-212ENST00000494815 GZMBP10144 247 aa15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 COA6Q5JTJ3 125 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 C16orf82Q7Z2V1 217 aa15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 SMIM7Q9BQ49 75 aa15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 ACTR3CQ9C0K3 210 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 HRNRQ86YZ3 2850 aaPredicted RBP15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 YLPM1P49750 1951 aaKnown RBP15.13■□□□□ 0.01
TSPAN4-212ENST00000494815 ADIRFQ15847 76 aa15.12■□□□□ 0.01
TSPAN4-212ENST00000494815 WDR61Q9GZS3 305 aaKnown RBP15.12■□□□□ 0.01
TSPAN4-212ENST00000494815 ERVK-16P61578 105 aa15.12■□□□□ 0.01
TSPAN4-212ENST00000494815 LINC00311Q8N616 119 aa15.12■□□□□ 0.01
TSPAN4-212ENST00000494815 ZNF596Q8TC21 504 aa15.12■□□□□ 0.01
TSPAN4-212ENST00000494815 NOL4LQ96MY1 436 aaPredicted RBP15.12■□□□□ 0.01
TSPAN4-212ENST00000494815 A6NNC1 897 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 GOSR1O95249 250 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 TMEM241Q24JQ0 296 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 AARDQ4LEZ3 155 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 ZNF833PQ6ZTB9 187 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 OR8B3Q8NGG8 313 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 RAB24Q969Q5 203 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 OR8B2Q96RD0 313 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 CHODLQ9H9P2 273 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 A8MWP6 167 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 EREGO14944 169 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 KBTBD11O94819 623 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 MEF2BQ02080 365 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 CENPVQ7Z7K6 275 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 NEIL1Q96FI4 390 aaPredicted RBP15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 ATG101Q9BSB4 218 aa15.11■□□□□ 0.01
TSPAN4-212ENST00000494815 LY6HO94772 140 aa15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 ELLP55199 621 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 COTL1Q14019 142 aa15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 BSXQ3C1V8 233 aa15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 OR51G1Q8NGK1 321 aa15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 C8orf46Q8TAG6 207 aa15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 UBTD1Q9HAC8 227 aa15.1■□□□□ 0.01
TSPAN4-212ENST00000494815 IGHV1-8P0DP01 117 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 FAM71F2Q6NXP2 309 aa15.09■□□□□ 0.01
TSPAN4-212ENST00000494815 TAF15Q92804 592 aaKnown RBP eCLIP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms