RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 RPL31P62899 125 aaKnown RBP9.17□□□□□ -0.94
CHMP3-209ENST00000494623 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 RTL8BQ17RB0 113 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 SPATA31B1PQ5VZV4 182 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 OR4X1Q8NH49 305 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 SEPSECSQ9HD40 501 aaKnown RBP9.17□□□□□ -0.94
CHMP3-209ENST00000494623 ELOVL5Q9NYP7 299 aa9.17□□□□□ -0.94
CHMP3-209ENST00000494623 LINC00587B1AMM8 73 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 UPK2O00526 184 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 FOXH1O75593 365 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 CXorf1O96002 111 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 IGFBP2P18065 325 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 STPG3Q8N7X2 389 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 H1FXQ92522 213 aaKnown RBP9.16□□□□□ -0.94
CHMP3-209ENST00000494623 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 OR51M1Q9H341 326 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 SRD5A3Q9H8P0 318 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 LINC00574Q9H8X3 128 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 PLEKHA3Q9HB20 300 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 KCNIP2Q9NS61 270 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 PRNDQ9UKY0 176 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 BSNQ9UPA5 3926 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 TEX50A0A1B0GTY4 177 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 PPP5D1E7EU14 171 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 PHOX2AO14813 284 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 REG1BP48304 166 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 RAB31Q13636 194 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 EFNB3Q15768 340 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 TMEM249Q2WGJ8 235 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 PYY3Q5JQD4 70 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 MOB3BQ86TA1 216 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 HIST3H2BBQ8N257 126 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 Q8NA96 180 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 LRFN3Q9BTN0 628 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 SAP30LQ9HAJ7 183 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 LINC00312Q9Y6C7 94 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 TANC2Q9HCD6 1990 aa9.16□□□□□ -0.94
CHMP3-209ENST00000494623 PPIAL4EA0A075B759 164 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 PPIAL4DF5H284 164 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 VENTXO95231 258 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 PPIAL4FP0DN26 164 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 FAM3BP58499 235 aaPredicted RBP9.15□□□□□ -0.94
CHMP3-209ENST00000494623 MLANAQ16655 118 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 TMEM200BQ69YZ2 307 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 LINC01551Q86U37 167 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 PYGO2Q9BRQ0 406 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 GAL3ST2Q9H3Q3 398 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 PPIAL4AQ9Y536 164 aa9.15□□□□□ -0.94
CHMP3-209ENST00000494623 FCN3O75636 299 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 ACTL6BO94805 426 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 FABP4P15090 132 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 HNF1AP20823 631 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 POU2AF1Q16633 256 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 PRR30Q53SZ7 412 aaPredicted RBP9.15□□□□□ -0.95
CHMP3-209ENST00000494623 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 ZNF114Q8NC26 417 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.95
CHMP3-209ENST00000494623 MRPL20Q9BYC9 149 aaKnown RBP9.15□□□□□ -0.95
CHMP3-209ENST00000494623 APC2O95996 2303 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 ADGRG4Q8IZF6 3080 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 TNCP24821 2201 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 ELOA3CA0A087WX78 387 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-209ENST00000494623 F6UZH7 168 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 C1QTNF9P0C862 333 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 SAA1P0DJI8 122 aaPredicted RBP9.14□□□□□ -0.95
CHMP3-209ENST00000494623 RHOBP62745 196 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 OR10W1Q8NGF6 305 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 OR4P4Q8NGL7 312 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 ZNF714Q96N38 554 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 YTHDF2Q9Y5A9 579 aaKnown RBP9.14□□□□□ -0.95
CHMP3-209ENST00000494623 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM178BH3BS89 294 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 RD3LP0DJH9 198 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 GCHFRP30047 84 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 NBL1P41271 181 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 RPL29P47914 159 aaKnown RBP9.14□□□□□ -0.95
CHMP3-209ENST00000494623 BPIFB3P59826 476 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 FAM78BQ5VT40 261 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 WFIKKN1Q96NZ8 548 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 ZNF257Q9Y2Q1 563 aa9.14□□□□□ -0.95
CHMP3-209ENST00000494623 PKDREJQ9NTG1 2253 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 GATA2P23769 480 aaPredicted RBP9.13□□□□□ -0.95
CHMP3-209ENST00000494623 RELQ04864 619 aaPredicted RBP9.13□□□□□ -0.95
CHMP3-209ENST00000494623 MEF2CQ06413 473 aaPredicted RBP9.13□□□□□ -0.95
CHMP3-209ENST00000494623 FOXC1Q12948 553 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM37Q8WXS4 190 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 NEUROG1Q92886 237 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 NDUFB3O43676 98 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 LINC00869P0C866 280 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 CHRNB4P30926 498 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 DIAPH2-AS1Q14236 149 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM30BQ3MIR4 351 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 ZNF833PQ6ZTB9 187 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 MIR17HGQ75NE6 70 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 HARBI1Q96MB7 349 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 TMEM106BQ9NUM4 274 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 KALRNO60229 2985 aa9.13□□□□□ -0.95
CHMP3-209ENST00000494623 CUL9Q8IWT3 2517 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms