RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 SBSPONQ8IVN8 264 aa25.22■■□□□ 1.63
CBX4-203ENST00000494546 CADM3Q8N126 398 aa25.22■■□□□ 1.63
CBX4-203ENST00000494546 Q8N1Y9 231 aa25.22■■□□□ 1.63
CBX4-203ENST00000494546 Q8N402 240 aa25.22■■□□□ 1.63
CBX4-203ENST00000494546 FAM212BQ9NTI7 297 aaPredicted RBP25.22■■□□□ 1.63
CBX4-203ENST00000494546 PRNDQ9UKY0 176 aa25.22■■□□□ 1.63
CBX4-203ENST00000494546 TBPP20226 339 aa25.21■■□□□ 1.63
CBX4-203ENST00000494546 ARRDC1Q8N5I2 433 aa25.21■■□□□ 1.63
CBX4-203ENST00000494546 GDPD1Q8N9F7 314 aa25.21■■□□□ 1.63
CBX4-203ENST00000494546 NDUFA4L2Q9NRX3 87 aa25.21■■□□□ 1.63
CBX4-203ENST00000494546 THYN1Q9P016 225 aa25.21■■□□□ 1.63
CBX4-203ENST00000494546 TRBV7-1A0A0A6YYK4 115 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 IZUMO1RA6ND01 250 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 PI3P19957 117 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 ADAMTSL5Q6ZMM2 481 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 DYNLRB2Q8TF09 96 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 LSM10Q969L4 123 aaKnown RBP25.2■■□□□ 1.62
CBX4-203ENST00000494546 TSC22D3Q99576 134 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 ZC4H2Q9NQZ6 224 aa25.2■■□□□ 1.62
CBX4-203ENST00000494546 CYB5BO43169 146 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 CLEC3BP05452 202 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 SERPINE2P07093 398 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 IGHV4-30-4P0DP06 118 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 TMBIM6P55061 237 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 LHFPL1Q86WI0 220 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 GPHB5Q86YW7 130 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 SGPP2Q8IWX5 399 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 TMEM229BQ8NBD8 167 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 OR4D10Q8NGI6 311 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 FKBP11Q9NYL4 201 aa25.19■■□□□ 1.62
CBX4-203ENST00000494546 LGALS9O00182 355 aa25.18■■□□□ 1.62
CBX4-203ENST00000494546 MECP2P51608 486 aaKnown RBP25.18■■□□□ 1.62
CBX4-203ENST00000494546 PPP5CP53041 499 aa25.18■■□□□ 1.62
CBX4-203ENST00000494546 TAS2R19P59542 299 aa25.18■■□□□ 1.62
CBX4-203ENST00000494546 SLC25A24Q6NUK1 477 aa25.18■■□□□ 1.62
CBX4-203ENST00000494546 SEC22AQ96IW7 307 aa25.18■■□□□ 1.62
CBX4-203ENST00000494546 BCL7BQ9BQE9 202 aa25.18■■□□□ 1.62
CBX4-203ENST00000494546 CCDC59Q9P031 241 aaKnown RBP25.18■■□□□ 1.62
CBX4-203ENST00000494546 ZNF320A2RRD8 509 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 C2orf70A6NJV1 201 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 DBX1A6NMT0 343 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 GABARAPH6UMI1 98 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 IGKV1-39P01597 117 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 IGKV1D-39P04432 117 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 EDN2P20800 178 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 GPR183P32249 361 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 RPL5P46777 297 aaKnown RBP25.17■■□□□ 1.62
CBX4-203ENST00000494546 CD300EQ496F6 205 aaPredicted RBP25.17■■□□□ 1.62
CBX4-203ENST00000494546 FAM106AQ4KMX7 169 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 H2BFWTQ7Z2G1 175 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 OR2K2Q8NGT1 345 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 OR5B3Q8NH48 314 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 ZNF502Q8TBZ5 544 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 DYNC2LI1Q8TCX1 351 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 MRGPRFQ96AM1 343 aa25.17■■□□□ 1.62
CBX4-203ENST00000494546 ZNF486Q96H40 463 aaPredicted RBP25.17■■□□□ 1.62
CBX4-203ENST00000494546 C15orf61A6NNL5 157 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 NOL3O60936 208 aaKnown RBP25.16■■□□□ 1.62
CBX4-203ENST00000494546 RAB3DO95716 219 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 FOLR2P14207 255 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 PTBP1P26599 531 aaKnown RBP eCLIP25.16■■□□□ 1.62
CBX4-203ENST00000494546 PIGPP57054 158 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 RND3P61587 244 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 SCGB2B2Q4G0G5 96 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 GTSCR1Q86UQ5 136 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 TMEM56Q96MV1 263 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 TMEM14BQ9NUH8 114 aa25.16■■□□□ 1.62
CBX4-203ENST00000494546 CD74P04233 296 aa25.15■■□□□ 1.62
CBX4-203ENST00000494546 STEAP1BQ6NZ63 245 aa25.15■■□□□ 1.62
CBX4-203ENST00000494546 OR4A16Q8NH70 328 aa25.15■■□□□ 1.62
CBX4-203ENST00000494546 DIRAS2Q96HU8 199 aa25.15■■□□□ 1.62
CBX4-203ENST00000494546 F11RQ9Y624 299 aaKnown RBP25.15■■□□□ 1.62
CBX4-203ENST00000494546 MRPS10P82664 201 aaKnown RBP25.14■■□□□ 1.62
CBX4-203ENST00000494546 TERB2Q8NHR7 220 aa25.14■■□□□ 1.62
CBX4-203ENST00000494546 VN1R17PQ8TDU5 208 aa25.14■■□□□ 1.62
CBX4-203ENST00000494546 THAP7Q9BT49 309 aaPredicted RBP25.14■■□□□ 1.62
CBX4-203ENST00000494546 MFAP2P55001 183 aa25.13■■□□□ 1.61
CBX4-203ENST00000494546 IL18Q14116 193 aa25.13■■□□□ 1.61
CBX4-203ENST00000494546 DEFB114Q30KQ6 69 aa25.13■■□□□ 1.61
CBX4-203ENST00000494546 PLET1Q6UQ28 207 aa25.13■■□□□ 1.61
CBX4-203ENST00000494546 CACNG8Q8WXS5 425 aa25.13■■□□□ 1.61
CBX4-203ENST00000494546 C6orf62Q9GZU0 229 aaPredicted RBP25.13■■□□□ 1.61
CBX4-203ENST00000494546 SSBP1Q04837 148 aaKnown RBP25.12■■□□□ 1.61
CBX4-203ENST00000494546 ZFAND1Q8TCF1 268 aa25.12■■□□□ 1.61
CBX4-203ENST00000494546 SMIM4Q8WVI0 70 aa25.12■■□□□ 1.61
CBX4-203ENST00000494546 C19orf73Q9NVV2 129 aa25.12■■□□□ 1.61
CBX4-203ENST00000494546 IGHV3-21A0A0B4J1V1 117 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 CBLN1P23435 193 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 FAAP20Q6NZ36 180 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 OR13C8Q8NGS7 320 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 TP53RKQ96S44 253 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 COPZ2Q9P299 210 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 SELENOKQ9Y6D0 94 aa25.11■■□□□ 1.61
CBX4-203ENST00000494546 IGHV3-35A0A0C4DH35 117 aa25.1■■□□□ 1.61
CBX4-203ENST00000494546 A8MZ25 164 aa25.1■■□□□ 1.61
CBX4-203ENST00000494546 H3BMQ9 156 aa25.1■■□□□ 1.61
CBX4-203ENST00000494546 MARCH1Q8TCQ1 289 aa25.1■■□□□ 1.61
CBX4-203ENST00000494546 RCHY1Q96PM5 261 aa25.1■■□□□ 1.61
CBX4-203ENST00000494546 ZMAT4Q9H898 229 aa25.1■■□□□ 1.61
CBX4-203ENST00000494546 TECRQ9NZ01 308 aaKnown RBP25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms