RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 ARHGAP5-AS1Q96IT6 56 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC35E1Q96K37 410 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR4C12Q96R67 309 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 RAB40CQ96S21 281 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ULBP2Q9BZM5 246 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR2AG1Q9H205 316 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 ONECUT1Q9UBC0 465 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 VDAC3Q9Y277 283 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 GOLT1BQ9Y3E0 138 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TRIOO75962 3097 aa2.02□□□□□ -2.09
CDC42EP3-205ENST00000494083 TRAV18A0A075B6X5 111 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A087X0K7 114 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CENPVL3A0A0U1RRI6 287 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 LILRA5A6NI73 299 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF850A8MQ14 1090 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 DHRS3O75911 302 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGLV2-11P01706 119 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF728P0DKX0 622 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF10P21506 573 aaPredicted RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 SFTPDP35247 375 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 TNFRSF4P43489 277 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CAPZBP47756 277 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 AKR1C2P52895 323 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 RANP62826 216 aaKnown RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 AKR1C1Q04828 323 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 LY6DQ14210 128 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 SMCO1Q147U7 214 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 BEX5Q5H9J7 111 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 PAPPA-AS1Q5QFB9 102 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 C9orf135Q5VTT2 229 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF497Q6ZNH5 498 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 C17orf64Q86WR6 236 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF439Q8NDP4 499 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 OR4B1Q8NGF8 309 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 GRHL3Q8TE85 626 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 FAM167A-AS1Q96KT0 104 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 PFDN5Q99471 154 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 SLC25A33Q9BSK2 321 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 WWTR1Q9GZV5 400 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 NPVFQ9HCQ7 196 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 TNFRSF19Q9NS68 423 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 MED29Q9NX70 200 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 AK3Q9UIJ7 227 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ERRFI1Q9UJM3 462 aaPredicted RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 HHLA2Q9UM44 414 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 LINC00312Q9Y6C7 94 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 FRAS1Q86XX4 4008 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZZEF1O43149 2961 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CSMD2Q7Z408 3487 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGLV2-18A0A075B6J9 118 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGKV1D-13A0A0B4J2D9 117 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A0U1RRA0 63 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 GNG14A0A1W2PPG7 69 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 C16orf97H3BN30 126 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 DUX1O43812 170 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 IGKV1-13P0DP09 117 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 HLA-DOBP13765 273 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 COL8A2P25067 703 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 MT3P25713 68 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 AK4P27144 223 aaPredicted RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 TSPOP30536 169 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 POLR2HP52434 150 aaKnown RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CLDN17P56750 224 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 GNMTQ14749 295 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 EXOSC7Q15024 291 aaKnown RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ARL6IP1Q15041 203 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 EFNB3Q15768 340 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 BVES-AS1Q5T3Y7 98 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ZNF818PQ6ZRF7 136 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 JAGN1Q8N5M9 183 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 FAM222BQ8WU58 562 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 TNFAIP8L1Q8WVP5 186 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 RDH5Q92781 318 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 TSACCQ96A04 125 aaPredicted RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 APH1AQ96BI3 265 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CPNE2Q96FN4 548 aaPredicted RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 C17orf77Q96MU5 243 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 SCGB3A2Q96PL1 93 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 DUX5Q96PT3 197 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 LINC00470Q9BZP3 86 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 GFRA4Q9GZZ7 299 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 ELOVL3Q9HB03 270 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 HIGD1BQ9P298 99 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 RNF24Q9Y225 148 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 PKHD1L1Q86WI1 4243 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CSMD3Q7Z407 3707 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 A0A1W2PPK0 400 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 WI2-2373I1.2A0A1W2PRP0 233 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 F2Z2F3 143 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 TSTD3H0UI37 97 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 SIRPB1O00241 398 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CYB5AP00167 134 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 PMP2P02689 132 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 DCNP07585 359 aaKnown RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 CHRNB4P30926 498 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 GRB2P62993 217 aaKnown RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 RUNX1Q01196 453 aa2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 MEF2BQ02080 365 aaPredicted RBP2.01□□□□□ -2.09
CDC42EP3-205ENST00000494083 FAM189A2Q15884 450 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms