RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 GADD45GO95257 159 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 TRGV3P03979 118 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 DBIP07108 87 aaKnown RBP1.91□□□□□ -2.1
SSB-212ENST00000494051 C8GP07360 202 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 RBP1P09455 135 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 SMIM17P0DL12 118 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 TBPL1P62380 186 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 GNA12Q03113 381 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 ENDOGQ14249 297 aaKnown RBP1.91□□□□□ -2.1
SSB-212ENST00000494051 ELOCQ15369 112 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 AGTRAPQ6RW13 159 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 SBSNQ6UWP8 590 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 FAM19A3Q7Z5A8 133 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 VN1R4Q7Z5H5 301 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 PRNTQ86SH4 94 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 SLC25A45Q8N413 288 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 CANT1Q8WVQ1 401 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 C1orf54Q8WWF1 131 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 APOBEC3DQ96AK3 386 aaPredicted RBP1.91□□□□□ -2.1
SSB-212ENST00000494051 GPR146Q96CH1 333 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 REEP6Q96HR9 211 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 CCDC115Q96NT0 180 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 NMNAT3Q96T66 252 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 SERPINI1Q99574 410 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 HIGD2AQ9BW72 106 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 C20orf27Q9GZN8 174 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 TMEM126AQ9H061 195 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 CXorf21Q9HAI6 301 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 HSPB8Q9UJY1 196 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 KLF13Q9Y2Y9 288 aaPredicted RBP1.91□□□□□ -2.1
SSB-212ENST00000494051 SETD5Q9C0A6 1442 aa1.91□□□□□ -2.1
SSB-212ENST00000494051 BAHCC1Q9P281 2608 aa1.9□□□□□ -2.1
SSB-212ENST00000494051 SORL1Q92673 2214 aa1.9□□□□□ -2.1
SSB-212ENST00000494051 TMED7-TICAM2A0A0A6YYA0 188 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 OR4C45A6NMZ5 311 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 RIIAD1A6NNX1 92 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 CLDN25C9JDP6 229 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 H3BSA7 217 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 FFAR1O14842 300 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 GYG2O15488 501 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 GSTZ1O43708 216 aaPredicted RBP1.9□□□□□ -2.11
SSB-212ENST00000494051 FAM107AO95990 144 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 IFNA10P01566 189 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 IFNA7P01567 189 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 GYPCP04921 128 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 HLA-DQB2P05538 268 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 UBBP0CG47 229 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 IMPA1P29218 277 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 GABRA3P34903 492 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 PPP1CCP36873 323 aaKnown RBP1.9□□□□□ -2.11
SSB-212ENST00000494051 PSMB3P49720 205 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 ZNF140P52738 457 aaPredicted RBP1.9□□□□□ -2.11
SSB-212ENST00000494051 DNAJB13P59910 316 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 RPS20P60866 119 aaKnown RBP1.9□□□□□ -2.11
SSB-212ENST00000494051 HERVK_113P63121 156 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 OR8B8Q15620 311 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 GRK1Q15835 563 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 LTC4SQ16873 150 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 TMEM241Q24JQ0 296 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 PLPPR5Q32ZL2 321 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 BAP18Q8IXM2 172 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 UMODL1-AS1Q8N2C9 162 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 KRTCAP2Q8N6L1 136 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 TMEM75Q8N9X5 138 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 OR51H1Q8NH63 302 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 SLC25A40Q8TBP6 338 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 GALMQ96C23 342 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 LYSMD1Q96S90 227 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 TMEM222Q9H0R3 208 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 MED28Q9H204 178 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 OR2D2Q9H210 308 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 KCNIP2Q9NS61 270 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 CALML5Q9NZT1 146 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 ANAPC10Q9UM13 185 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 C2orf16Q68DN1 1984 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 MYO15BQ96JP2 1530 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 NPATQ14207 1427 aa1.9□□□□□ -2.11
SSB-212ENST00000494051 COL5A3P25940 1745 aaPredicted RBP1.89□□□□□ -2.11
SSB-212ENST00000494051 DNMT1P26358 1616 aaKnown RBP1.89□□□□□ -2.11
SSB-212ENST00000494051 A0A0B4J2C4 111 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 K7ERU9 68 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 M0R2Z0 102 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 SLC37A4O43826 429 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 IFNGP01579 166 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 C1QBP02746 253 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 C1QCP02747 245 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 IGKV1-16P04430 117 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 SMIM6P0DI80 62 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 CTSEP14091 401 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 ZNF25P17030 456 aaPredicted RBP1.89□□□□□ -2.11
SSB-212ENST00000494051 CSRP1P21291 193 aaKnown RBP1.89□□□□□ -2.11
SSB-212ENST00000494051 CCL1P22362 96 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 PPIBP23284 216 aaKnown RBP1.89□□□□□ -2.11
SSB-212ENST00000494051 CD200P41217 278 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 RAB13P51153 203 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 ZNF83P51522 516 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 C1QTNF8P60827 252 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 RRAS2P62070 204 aaPredicted RBP1.89□□□□□ -2.11
SSB-212ENST00000494051 CAV1Q03135 178 aa1.89□□□□□ -2.11
SSB-212ENST00000494051 MMDQ15546 238 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms