RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GSTZ1O43708 216 aaPredicted RBP17.29■□□□□ 0.36
SNIP1-203ENST00000493916 NDUFB8O95169 186 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 IGKV1-39P01597 117 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 IGKV1D-39P04432 117 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 PI3P19957 117 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 PIGPP57054 158 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 TATDN3Q17R31 274 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 IL34Q6ZMJ4 242 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 ZFAND1Q8TCF1 268 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 SEC22AQ96IW7 307 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 B9D2Q9BPU9 175 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 SOSTQ9BQB4 213 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 RBM38Q9H0Z9 239 aaKnown RBP17.29■□□□□ 0.36
SNIP1-203ENST00000493916 NDUFA4L2Q9NRX3 87 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 TMEM14BQ9NUH8 114 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 FKBP11Q9NYL4 201 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 OR51B2Q9Y5P1 312 aa17.29■□□□□ 0.36
SNIP1-203ENST00000493916 LY86O95711 162 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 IGLV1-51P01701 117 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 SERPINE2P07093 398 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 TNFSF8P32971 234 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 SCGB2B2Q4G0G5 96 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 GDPD1Q8N9F7 314 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 OR10W1Q8NGF6 305 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 OR13C8Q8NGS7 320 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 OR5B3Q8NH48 314 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 LSM10Q969L4 123 aaKnown RBP17.28■□□□□ 0.36
SNIP1-203ENST00000493916 EEF1AKMT3Q96AZ1 226 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 CCDC140Q96MF4 163 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 NSG2Q9Y328 171 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 DMRT1Q9Y5R6 373 aa17.28■□□□□ 0.36
SNIP1-203ENST00000493916 C15orf61A6NNL5 157 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 AKAIN1P0CW23 69 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 SPNP16150 400 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 WT1-ASQ06250 92 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 MRGPRFQ96AM1 343 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 SIGLEC8Q9NYZ4 499 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 DNAH9Q9NYC9 4486 aa17.27■□□□□ 0.36
SNIP1-203ENST00000493916 CCDC160A6NGH7 325 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 DISC1C4P0D8 188 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 CYB5BO43169 146 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 CTSDP07339 412 aaPredicted RBP17.26■□□□□ 0.35
SNIP1-203ENST00000493916 FAAP20Q6NZ36 180 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 H2BFWTQ7Z2G1 175 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 CCDC71LQ8N9Z2 235 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 OR4C16Q8NGL9 310 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 MARCH1Q8TCQ1 289 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 CXorf58Q96LI9 332 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 TP53RKQ96S44 253 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 THYN1Q9P016 225 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 COPZ2Q9P299 210 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 PEMTQ9UBM1 199 aa17.26■□□□□ 0.35
SNIP1-203ENST00000493916 TRBV7-1A0A0A6YYK4 115 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 C3orf85A0A1B0GTC6 90 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 ANKRD20A5PA0PJZ0 165 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 FABP12A6NFH5 140 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 DBX1A6NMT0 343 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 PPP5D1E7EU14 171 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 ZNF701M0R085 212 aaPredicted RBP17.25■□□□□ 0.35
SNIP1-203ENST00000493916 GGCTO75223 188 aaKnown RBP17.25■□□□□ 0.35
SNIP1-203ENST00000493916 CSN3P07498 182 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 OR13C7P0DN81 318 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 GP9P14770 177 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 CD69Q07108 199 aa17.25■□□□□ 0.35
SNIP1-203ENST00000493916 SURF2Q15527 256 aaPredicted RBP17.25■□□□□ 0.35
SNIP1-203ENST00000493916 B3GALNT1O75752 331 aa17.24■□□□□ 0.35
SNIP1-203ENST00000493916 IGHV3-23P01764 117 aa17.24■□□□□ 0.35
SNIP1-203ENST00000493916 HAPLN4Q86UW8 402 aa17.24■□□□□ 0.35
SNIP1-203ENST00000493916 OR4A16Q8NH70 328 aa17.24■□□□□ 0.35
SNIP1-203ENST00000493916 TMEM56Q96MV1 263 aa17.24■□□□□ 0.35
SNIP1-203ENST00000493916 HINT2Q9BX68 163 aa17.24■□□□□ 0.35
SNIP1-203ENST00000493916 MFSD2BA6NFX1 497 aa17.23■□□□□ 0.35
SNIP1-203ENST00000493916 ARL3P36405 182 aa17.23■□□□□ 0.35
SNIP1-203ENST00000493916 CLEC19AQ6UXS0 136 aa17.23■□□□□ 0.35
SNIP1-203ENST00000493916 PRRT1Q99946 306 aa17.23■□□□□ 0.35
SNIP1-203ENST00000493916 SLC2A8Q9NY64 477 aa17.23■□□□□ 0.35
SNIP1-203ENST00000493916 F11RQ9Y624 299 aaKnown RBP17.23■□□□□ 0.35
SNIP1-203ENST00000493916 S4R3C0 116 aa17.23■□□□□ 0.35
SNIP1-203ENST00000493916 ATG12O94817 140 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 IGKV1-5P01602 117 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 P0C879 139 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 GPHB5Q86YW7 130 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 ZNF502Q8TBZ5 544 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 VN1R17PQ8TDU5 208 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 C14orf166Q9Y224 244 aaKnown RBP17.22■□□□□ 0.35
SNIP1-203ENST00000493916 SMAD5-AS1Q9Y6J3 95 aa17.22■□□□□ 0.35
SNIP1-203ENST00000493916 LGALS9O00182 355 aa17.21■□□□□ 0.35
SNIP1-203ENST00000493916 HLA-AP01891 365 aaKnown RBP17.21■□□□□ 0.35
SNIP1-203ENST00000493916 UCP1P25874 307 aa17.21■□□□□ 0.35
SNIP1-203ENST00000493916 OR1L6Q8NGR2 347 aa17.21■□□□□ 0.35
SNIP1-203ENST00000493916 RTBDNQ9BSG5 229 aaPredicted RBP17.21■□□□□ 0.35
SNIP1-203ENST00000493916 OR2C1O95371 312 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 MECP2P51608 486 aaKnown RBP17.2■□□□□ 0.34
SNIP1-203ENST00000493916 MFAP2P55001 183 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 PRCDQ00LT1 54 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 TRIM16LQ309B1 348 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 OR51S1Q8NGJ8 323 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 C5orf66Q9H5L9 145 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 V9GYH0 126 aa17.2■□□□□ 0.34
SNIP1-203ENST00000493916 CLEC3BP05452 202 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms