RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	PUSL1	Q8N0Z8	303 aa	Known RBP	5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	GVQW1	Q8N7I0	195 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	DMBX1	Q8NFW5	382 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	OR4A5	Q8NH83	315 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	CD300LF	Q8TDQ1	290 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	ST8SIA2	Q92186	375 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	BORCS5	Q969J3	196 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	S100A16	Q96FQ6	103 aa	Known RBP	5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	CXorf58	Q96LI9	332 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	IFT46	Q9NQC8	304 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	THYN1	Q9P016	225 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853		S4R3C0	116 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	DNAH9	Q9NYC9	4486 aa		5.7	□□□□□ -1.5
RBM39-238	ENST00000493853	TRBV7-1	A0A0A6YYK4	115 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	C2orf70	A6NJV1	201 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF785	A8K8V0	405 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853		E7EUB6	86 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	LGALS9	O00182	355 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	NDUFB8	O95169	186 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	HPRT1	P00492	218 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	IGLV2-14	P01704	120 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	REG1A	P05451	166 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	CLEC3B	P05452	202 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	CRYGC	P07315	174 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	CD7	P09564	240 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	NQO2	P16083	231 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	CBLN1	P23435	193 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	TAS2R31	P59538	309 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	ERVK-16	P61578	105 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	MSMO1	Q15800	293 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	NEDD8	Q15843	81 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	ANKRD55	Q3KP44	614 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	TIMM50	Q3ZCQ8	353 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	AADACL3	Q5VUY0	350 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF57	Q68EA5	555 aa	Predicted RBP	5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	PLET1	Q6UQ28	207 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	C19orf35	Q6ZS72	473 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM17	Q86X19	198 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	HOGA1	Q86XE5	327 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	CROCCP3	Q8IVE0	287 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	DEFB125	Q8N687	156 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	TSPAN14	Q8NG11	270 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	OR5AP2	Q8NGF4	316 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	OR52B4	Q8NGK2	314 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	OR5H6	Q8NGV6	325 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	AUNIP	Q9H7T9	357 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	SRD5A3	Q9H8P0	318 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	EDA2R	Q9HAV5	297 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	BET1L	Q9NYM9	111 aa		5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.69	□□□□□ -1.5
RBM39-238	ENST00000493853	LCE6A	A0A183	80 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	MEIS3P1	A6NDR6	274 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	RBFOX2	O43251	390 aa	Known RBP eCLIP	5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	TMEM127	O75204	238 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	PTHLH	P12272	177 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	AREG	P15514	252 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	RPA2	P15927	270 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	CTRB1	P17538	263 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	S100G	P29377	79 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	BRWD1-AS2	P59051	145 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	CTRB2	Q6GPI1	263 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	SLC25A24	Q6NUK1	477 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	CMTM1	Q8IZ96	169 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	SLC38A6	Q8IZM9	456 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	UXS1	Q8NBZ7	420 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	OR51H1	Q8NH63	302 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	GIMAP1	Q8WWP7	306 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	THAP7	Q9BT49	309 aa	Predicted RBP	5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	HINT2	Q9BX68	163 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	HIPK2	Q9H2X6	1198 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	RNF167	Q9H6Y7	350 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	PLEKHA2	Q9HB19	425 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	VCX3A	Q9NNX9	186 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	ZC4H2	Q9NQZ6	224 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	GAR1	Q9NY12	217 aa	Known RBP	5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	EHF	Q9NZC4	300 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	SELENOK	Q9Y6D0	94 aa		5.68	□□□□□ -1.5
RBM39-238	ENST00000493853	SORL1	Q92673	2214 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	SMIM31	A0A1B0GVY4	71 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	UPK2	O00526	184 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	XRCC3	O43542	346 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	SNAPC5	O75971	98 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	JTB	O76095	146 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	SCAF4	O95104	1147 aa	Known RBP	5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	TRAPPC2	P0DI81	140 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	TRAPPC2B	P0DI82	140 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	OR13C7	P0DN81	318 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	MYOD1	P15172	320 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	GPR183	P32249	361 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	RFX2	P48378	723 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	OR2B8P	P59922	312 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	EIF4EBP1	Q13541	118 aa	Predicted RBP	5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF585B	Q52M93	769 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	LAMTOR1	Q6IAA8	161 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	ADAMTSL5	Q6ZMM2	481 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	ZNF818P	Q6ZRF7	136 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	OR1L8	Q8NGR8	309 aa		5.67	□□□□□ -1.5
RBM39-238	ENST00000493853	OR5H2	Q8NGV7	314 aa		5.67	□□□□□ -1.5

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