RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 MIR17HGQ75NE6 70 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 GGNQ86UU5 652 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 OR10D3Q8NH80 312 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 TMEM45BQ96B21 275 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 GALMQ96C23 342 aa9.69□□□□□ -0.86
HDAC4-210ENST00000493582 MBNL3Q9NUK0 354 aaKnown RBP9.69□□□□□ -0.86
HDAC4-210ENST00000493582 IGHV3-43A0A0B4J1X8 118 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 A0A0G2JMM0 328 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 A0A1W2PPB8 328 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 KIR3DP1A8MWS1 328 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 IGHV3-43DP0DP04 118 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 MFAP2P55001 183 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 EIF4EBP1Q13541 118 aaPredicted RBP9.68□□□□□ -0.86
HDAC4-210ENST00000493582 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 TMEM70Q9BUB7 260 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 ZNF430Q9H8G1 570 aaPredicted RBP9.68□□□□□ -0.86
HDAC4-210ENST00000493582 A0A087X0K7 114 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 C12orf77C9JDV5 145 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 MT-CO2P00403 227 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 IGLV2-8P01709 118 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 VEGFBP49765 207 aa9.68□□□□□ -0.86
HDAC4-210ENST00000493582 ISLRO14498 428 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 IGLV3-19P01714 112 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 CAMPP49913 170 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 B3GALT5-AS1P59052 145 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 FAM234AQ9H0X4 552 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 GJE1A6NN92 205 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 HSBP1L1C9JCN9 74 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 PSPNO60542 156 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 RFPL3SP0C7P2 107 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 FAM71F2Q6NXP2 309 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 FAM214BQ7L5A3 538 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 LINC00479Q96M42 142 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 ZNF355PQ9NSJ1 428 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 KCNIP1Q9NZI2 227 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 KMT2EQ8IZD2 1858 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 TFF1P04155 84 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 CD24P25063 80 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 CCL7P80098 99 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 AESQ08117 197 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 FOXE3Q13461 319 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 ZBTB34Q8NCN2 500 aa9.67□□□□□ -0.86
HDAC4-210ENST00000493582 KNTC1P50748 2209 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 TRAV3A0A0B4J244 114 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 PRSS46E5RG02 174 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 HBZP02008 142 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 NBEAP1P0C6P0 100 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 AREGP15514 252 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 WIPI1Q5MNZ9 446 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-210ENST00000493582 TPRX1Q8N7U7 411 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 TSTD1Q8NFU3 115 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 FAM216AQ8WUB2 273 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 ST20Q9HBF5 79 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 NPVFQ9HCQ7 196 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 DOCK10Q96BY6 2186 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 IGHV1OR15-9A0A0B4J2B8 117 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 H0Y8G0 127 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 SNAI2O43623 268 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 GFRA3O60609 400 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 GOSR1O95249 250 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 CD27P26842 260 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 PCOLCEQ15113 449 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 C12orf54Q6X4T0 127 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 LHFPL4Q7Z7J7 247 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 WDR86Q86TI4 376 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 SLC25A45Q8N413 288 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 NINJ1Q92982 152 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 URB1-AS1Q96HZ7 61 aa9.66□□□□□ -0.86
HDAC4-210ENST00000493582 CDX2Q99626 313 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-210ENST00000493582 LSM4Q9Y4Z0 139 aaKnown RBP9.66□□□□□ -0.86
HDAC4-210ENST00000493582 GGTLC3B5MD39 225 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 MRPL33O75394 65 aaKnown RBP9.65□□□□□ -0.86
HDAC4-210ENST00000493582 GABRA6Q16445 453 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 LTC4SQ16873 150 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 PRAMEF5Q5TYX0 476 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 PRAMEF6Q5VXH4 476 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 SH2D2AQ9NP31 389 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 PSG11Q9UQ72 335 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 TNRC6AQ8NDV7 1962 aaKnown RBP9.65□□□□□ -0.86
HDAC4-210ENST00000493582 FCGR3BO75015 233 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 IGLC1P0CG04 106 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 IGFBP2P18065 325 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 OR4A16Q8NH70 328 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 HSD17B10Q99714 261 aaKnown RBP9.65□□□□□ -0.86
HDAC4-210ENST00000493582 WDR54Q9H977 334 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 SAP30LQ9HAJ7 183 aa9.65□□□□□ -0.86
HDAC4-210ENST00000493582 URB1O60287 2271 aaKnown RBP9.65□□□□□ -0.87
HDAC4-210ENST00000493582 HCFC1P51610 2035 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 J3QT63 122 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 OR7C2O60412 319 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 WISP2O76076 250 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 SSR4P51571 173 aa9.65□□□□□ -0.87
HDAC4-210ENST00000493582 FOXA3P55318 350 aaPredicted RBP9.65□□□□□ -0.87
HDAC4-210ENST00000493582 FER1L6-AS1Q8NA97 138 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms