RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FOXI3A8MTJ6 420 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 LEUTXA8MZ59 168 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 E5RGE8 158 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CCRL2O00421 344 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 TOR1AO14656 332 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 SH2D1BO14796 132 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 MYL12BO14950 172 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ARPC1BO15143 372 aaKnown RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 LANCL1O43813 399 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 OR2F2O95006 317 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CYB5AP00167 134 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 IGHV3-23P01764 117 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 MT-ND4P03905 459 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CDK1P06493 297 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 PRB4P10163 310 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RRASP10301 218 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 PRKACBP22694 351 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CD34P28906 385 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 WNT4P56705 351 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RPL23AP62750 156 aaKnown RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 PPP3R1P63098 170 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 HERV-K104P63124 156 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 QRFPP83859 136 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 BDH1Q02338 343 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 MXD1Q05195 221 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RAB40BQ12829 278 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 SPHARQ15513 63 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 Q3ZCU0 254 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 Q499Y3 187 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ACSM3Q53FZ2 586 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 DEFB121Q5J5C9 76 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 SPIN3Q5JUX0 258 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 KPRPQ5T749 579 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ZFAND6Q6FIF0 208 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 DHRS11Q6UWP2 260 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 IZUMO2Q6UXV1 221 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 Q6ZVQ6 151 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 COX8CQ7Z4L0 72 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 SLC35E3Q7Z769 313 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 VKORC1L1Q8N0U8 176 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 Q8N2B8 174 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 SYS1Q8N2H4 156 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 STPG2Q8N412 459 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 STX19Q8N4C7 294 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 DHRSXQ8N5I4 330 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 TEX29Q8N6K0 151 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 OR51D1Q8NGF3 324 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 OR5H6Q8NGV6 325 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 OR10X1Q8NGY0 326 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 OR9G1Q8NH87 305 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 GRPEL2Q8TAA5 225 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 GPR148Q8TDV2 347 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RTN4IP1Q8WWV3 396 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CACNG8Q8WXS5 425 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ARPC1AQ92747 370 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 STMN2Q93045 179 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 PINX1Q96BK5 328 aaKnown RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM80Q96HE8 168 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ARHGAP5-AS1Q96IT6 56 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RBM14Q96PK6 669 aaKnown RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 S1PR3Q99500 378 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 NABP2Q9BQ15 211 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF251Q9BRH9 671 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ANKRD60Q9BZ19 345 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CCDC90BQ9GZT6 254 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 LPAR5Q9H1C0 372 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RANBP3Q9H6Z4 567 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 TAF9BQ9HBM6 251 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ABCB9Q9NP78 766 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 ZC4H2Q9NQZ6 224 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 PLSCR3Q9NRY6 295 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 FKBP14Q9NWM8 211 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 GNG12Q9UBI6 72 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 RABL2AQ9UBK7 228 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 NSG2Q9Y328 171 aa2.11□□□□□ -2.07
PTCD3-218ENST00000493430 CAB39Q9Y376 341 aaPredicted RBP2.11□□□□□ -2.07
PTCD3-218ENST00000493430 TRAV9-2A0A087WT02 112 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 IGHV3-21A0A0B4J1V1 117 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 IGHV7-81A0A0B4J1V7 117 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1D-13A0A0B4J2D9 117 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 A0A1B0GW64 132 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 DHRS7CA6NNS2 312 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 VGLL3A8MV65 326 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 E7EUB6 86 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 H0YHG0 523 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 CASQ2O14958 399 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 GPX5O75715 221 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ATP5HO75947 161 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 CA2P00918 260 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 SERPINA3P01011 423 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 HLA-AP01891 365 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1-16P04430 117 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 REG1AP05451 166 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 CSN2P05814 226 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 GSTT2P0CG29 244 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 GSTT2BP0CG30 244 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 IGKV1-13P0DP09 117 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 SPNP16150 400 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MYL12AP19105 171 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms