RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 SULT1A4P0DMN0 295 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CD79AP11912 226 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 HIST1H1TP22492 207 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 MSNP26038 577 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CDKN2CP42773 168 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 HAAOP46952 286 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 OMPP47874 163 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CEBPGP53567 150 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 PSME3P61289 254 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 LSM6P62312 80 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 HIST1H4AP62805 103 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CCL20P78556 96 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 RPL18Q07020 188 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 KTN1-AS1Q86SY8 53 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 TRAPPC5Q8IUR0 188 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 LRRC25Q8N386 305 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 CLDN22Q8N7P3 220 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZNF676Q8N7Q3 588 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 DOHHQ9BU89 302 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 WDR61Q9GZS3 305 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 IL36BQ9NZH7 164 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 MRPL27Q9P0M9 148 aaKnown RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 KDM5BQ9UGL1 1544 aa0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 DENND4BO75064 1496 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P30-201ENST00000492455 FBN3Q75N90 2809 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 A0A087WUJ7 227 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 GGT3PA6NGU5 568 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 OR51F1A6NGY5 319 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 HMSDA8MTL9 139 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 GOLGA6L19H0YKK7 550 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 FAAHO00519 579 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 RPP14O95059 124 aaKnown RBP0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 IGHV3-7P01780 117 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 HLA-DRB1P01911 266 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 PPBPP02775 128 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 TCRBP04435 133 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 PRM2P04554 102 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 GPX1P07203 203 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 MSMBP08118 114 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 RANP62826 216 aaKnown RBP0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 AESQ08117 197 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 TMEM155Q4W5P6 130 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 IBA57Q5T440 356 aaKnown RBP0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 C9orf64Q5T6V5 341 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 TMEM42Q69YG0 159 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 Q6ZS49 121 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 OR5B17Q8NGF7 314 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 PPP1R14BQ96C90 147 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 OR51V1Q9H2C8 321 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 C8orf4Q9NR00 106 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 PKIGQ9Y2B9 76 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 FREM1Q5H8C1 2179 aa0.98□□□□□ -2.25
HMGB1P30-201ENST00000492455 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 HELZ2Q9BYK8 2649 aaKnown RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 SIGLEC16A6NMB1 481 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 FABP5P3A8MUU1 101 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 TRAPPC2LH3BP13 241 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 PSMD12O00232 456 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 SLC22A1O15245 554 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 CIAO1O76071 339 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 TTRP02766 147 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 AQP4P55087 323 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 RPS20P60866 119 aaKnown RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 SNRPD2P62316 118 aaKnown RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 KISS1Q15726 138 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 KCNJ8Q15842 424 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 SLC36A1Q7Z2H8 476 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 COA5Q86WW8 74 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 C9orf163Q8N9P6 203 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 MRPL30Q8TCC3 161 aaKnown RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 C8orf76Q96K31 380 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 NIPSNAP1Q9BPW8 284 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 HSPB9Q9BQS6 159 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 DERL1Q9BUN8 251 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 DOK5Q9P104 306 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 RGS12O14924 1447 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 ZFYVE9O95405 1425 aa0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 WRNQ14191 1432 aaPredicted RBP eCLIP0.97□□□□□ -2.25
HMGB1P30-201ENST00000492455 FLT4P35916 1363 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 MTUS2Q5JR59 1369 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 DISP1Q96F81 1524 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 BAZ2BQ9UIF8 2168 aaKnown RBP0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 WDR90Q96KV7 1748 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 IGKV1D-43A0A0B4J1Z2 117 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRBV10-2A0A0K0K1G8 114 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 PQLC2LA1A4F0 135 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 IRGMA1A4Y4 181 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 OR4C46A6NHA9 309 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 IGKV1-5P01602 117 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 TRGC1P0CF51 173 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 ZNF705BP0CI00 300 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 RPL5P46777 297 aaKnown RBP0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 FXYD2P54710 66 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 SUPT4H1P63272 117 aaKnown RBP0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 HBA1P69905 142 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 MOGQ16653 247 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 FAM27BQ5VT28 67 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 AADACL3Q5VUY0 350 aa0.96□□□□□ -2.26
HMGB1P30-201ENST00000492455 TMEM86AQ8N2M4 240 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms