RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MND1Q9BWT6 205 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 KRTAP4-5Q9BYR2 181 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
USF1-206ENST00000491629 RPA2P15927 270 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 HIST1H1DP16402 221 aaKnown RBP9.69□□□□□ -0.86
USF1-206ENST00000491629 NFYAP23511 347 aaPredicted RBP9.69□□□□□ -0.86
USF1-206ENST00000491629 MAS1LP35410 378 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 MAP2K4P45985 399 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 AP2S1P53680 142 aaPredicted RBP9.69□□□□□ -0.86
USF1-206ENST00000491629 IRF3Q14653 427 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 FAM122CQ6P4D5 195 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 ZNF773Q6PK81 442 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 C8orf59Q8N0T1 100 aaPredicted RBP9.69□□□□□ -0.86
USF1-206ENST00000491629 TMEM217Q8N7C4 229 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 OR5B3Q8NH48 314 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 TMEM190Q8WZ59 177 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 GALNT14Q96FL9 552 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 FBXL17Q9UF56 701 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 RAB22AQ9UL26 194 aa9.69□□□□□ -0.86
USF1-206ENST00000491629 IGHV3OR16-8A0A075B7F1 116 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 IGLC7A0M8Q6 106 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 PTTG1O95997 202 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 TRAPPC2P0DI81 140 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 TRAPPC2BP0DI82 140 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 HIST1H1BP16401 226 aaKnown RBP9.68□□□□□ -0.86
USF1-206ENST00000491629 B2MP61769 119 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 MRPS15P82914 257 aaKnown RBP9.68□□□□□ -0.86
USF1-206ENST00000491629 SSX9Q7RTT3 188 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 C11orf45Q8TAV5 145 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 C11orf68Q9H3H3 251 aaKnown RBP9.68□□□□□ -0.86
USF1-206ENST00000491629 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
USF1-206ENST00000491629 PRELID3BQ9Y3B1 194 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 UFC1Q9Y3C8 167 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 V9GY05 133 aa9.68□□□□□ -0.86
USF1-206ENST00000491629 TRAV3A0A0B4J244 114 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 F8W735 103 aaPredicted RBP9.67□□□□□ -0.86
USF1-206ENST00000491629 DEFB4AO15263 64 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 TGOLN2O43493 480 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 PTBP1P26599 531 aaKnown RBP eCLIP9.67□□□□□ -0.86
USF1-206ENST00000491629 OR2B8PP59922 312 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 RPL8P62917 257 aaKnown RBP9.67□□□□□ -0.86
USF1-206ENST00000491629 FABP5Q01469 135 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 RBMS2Q15434 407 aaKnown RBP9.67□□□□□ -0.86
USF1-206ENST00000491629 MED22Q15528 200 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 PLET1Q6UQ28 207 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 OR4S2Q8NH73 311 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 VSTM2AQ8TAG5 236 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 CD300LFQ8TDQ1 290 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 CXorf58Q96LI9 332 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 RARRES2Q99969 163 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 CHRDL1Q9BU40 450 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 SPATA2Q9UM82 520 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 MRPS7Q9Y2R9 242 aaKnown RBP9.67□□□□□ -0.86
USF1-206ENST00000491629 HSPG2P98160 4391 aa9.67□□□□□ -0.86
USF1-206ENST00000491629 OR2T8A6NH00 312 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 PTGES3LE9PB15 166 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 ZNF207O43670 478 aaKnown RBP9.66□□□□□ -0.86
USF1-206ENST00000491629 DHFRP00374 187 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
USF1-206ENST00000491629 ZNF182P17025 639 aaPredicted RBP9.66□□□□□ -0.86
USF1-206ENST00000491629 HLA-GP17693 338 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 CRHBPP24387 322 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 ADMP35318 185 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 PPP5CP53041 499 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 MFAP2P55001 183 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 OR10A3P58181 314 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 GABARAPL2P60520 117 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 TIMM50Q3ZCQ8 353 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 PRSS48Q7RTY5 328 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 OR10W1Q8NGF6 305 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 OR11H2Q8NH07 326 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 C2CD4CQ8TF44 421 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 TCTEX1D2Q8WW35 142 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 UFD1Q92890 307 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 DAZ1Q9NQZ3 744 aaKnown RBP9.66□□□□□ -0.86
USF1-206ENST00000491629 TAS2R8Q9NYW2 309 aa9.66□□□□□ -0.86
USF1-206ENST00000491629 MED14OSP0DP75 135 aa9.65□□□□□ -0.86
USF1-206ENST00000491629 DEFA4P12838 97 aa9.65□□□□□ -0.86
USF1-206ENST00000491629 GVQW1Q8N7I0 195 aa9.65□□□□□ -0.86
USF1-206ENST00000491629 BET1LQ9NYM9 111 aa9.65□□□□□ -0.86
USF1-206ENST00000491629 IGHV3-21A0A0B4J1V1 117 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 OR4C46A6NHA9 309 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 MPTX1A8MV57 137 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 IGLL5B9A064 214 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 ARL6IP5O75915 188 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 IFNA4P05014 189 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 CD36P16671 472 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 DTYMKP23919 212 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 GADD45AP24522 165 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 LAMTOR1Q6IAA8 161 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 NR2C2APQ86WQ0 139 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 RNF2Q99496 336 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 HSD17B10Q99714 261 aaKnown RBP9.64□□□□□ -0.87
USF1-206ENST00000491629 MFFQ9GZY8 342 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 ETV7Q9Y603 341 aa9.64□□□□□ -0.87
USF1-206ENST00000491629 NDUFA4O00483 81 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms