RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	AADACL3	Q5VUY0	350 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	SPSB3	Q6PJ21	355 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	BTNL8	Q6UX41	500 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	UNQ9165/PRO28630	Q6UXU0	137 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	SLC38A6	Q8IZM9	456 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	GDPD1	Q8N9F7	314 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	OR1L6	Q8NGR2	347 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	OR1L8	Q8NGR8	309 aa		13.41	□□□□□ -0.26
GGA1-223	ENST00000491295	TRAV3	A0A0B4J244	114 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	TGOLN2	O43493	480 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	SERPINE2	P07093	398 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	F2R	P25116	425 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	OR2C3	Q8N628	320 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	OR51H1	Q8NH63	302 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	BSCL2	Q96G97	398 aa	Predicted RBP	13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	SPAG8	Q99932	426 aa	Predicted RBP	13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	IFT46	Q9NQC8	304 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	TP53TG1	Q9Y2A0	90 aa		13.4	□□□□□ -0.26
GGA1-223	ENST00000491295	S1PR2	O95136	353 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	OR13C7	P0DN81	318 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	LAMTOR1	Q6IAA8	161 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	TMEM17	Q86X19	198 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	CMTM1	Q8IZ96	169 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	OVOL2	Q9BRP0	275 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	RNF167	Q9H6Y7	350 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	FKBP11	Q9NYL4	201 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	EHF	Q9NZC4	300 aa		13.39	□□□□□ -0.27
GGA1-223	ENST00000491295	DNAH1	Q9P2D7	4330 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	TEX50	A0A1B0GTY4	177 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	MARCH11	A6NNE9	402 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	UBE2C	O00762	179 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	TSPAN4	O14817	238 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	PGLYRP1	O75594	196 aa	Predicted RBP	13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	SNAPC5	O75971	98 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	APOC4	P55056	127 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	TAS2R46	P59540	309 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	SLC25A24	Q6NUK1	477 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295		Q6ZWC4	215 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	WFDC3	Q8IUB2	231 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	OR10W1	Q8NGF6	305 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	TMEM190	Q8WZ59	177 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	LSM10	Q969L4	123 aa	Known RBP	13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	MOB3A	Q96BX8	217 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	DAZ1	Q9NQZ3	744 aa	Known RBP	13.38	□□□□□ -0.27
GGA1-223	ENST00000491295	NDUFA4L2	Q9NRX3	87 aa		13.38	□□□□□ -0.27
GGA1-223	ENST00000491295		K7EMT4	169 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	NDUFA4	O00483	81 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	NAT1	P18440	290 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	WT1-AS	Q06250	92 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	UBE2NL	Q5JXB2	153 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	OR6F1	Q8NGZ6	308 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	DGCR14	Q96DF8	476 aa	Known RBP	13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	ANAPC10	Q9UM13	185 aa		13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	F11R	Q9Y624	299 aa	Known RBP	13.37	□□□□□ -0.27
GGA1-223	ENST00000491295	FCER2	P06734	321 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	RFX2	P48378	723 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	NEDD8	Q15843	81 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	KCTD21	Q4G0X4	260 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	TSPAN14	Q8NG11	270 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	OR5B3	Q8NH48	314 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	TMEM56	Q96MV1	263 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	C21orf62	Q9NYP8	219 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	PRND	Q9UKY0	176 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	SELENOK	Q9Y6D0	94 aa		13.36	□□□□□ -0.27
GGA1-223	ENST00000491295	IGHV3-35	A0A0C4DH35	117 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	KIR2DL5B	A0A0G2JN68	375 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	KIR2DL5B	A0A0G2JPC4	375 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	MEIS3P1	A6NDR6	274 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	OR2T8	A6NH00	312 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	KRAS	P01116	189 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	RLN1	P04808	185 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	S100G	P29377	79 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	BMI1	P35226	326 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	LPAR6	P43657	344 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	TMEM69	Q5SWH9	247 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	LPCAT3	Q6P1A2	487 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	KIR2DL5A	Q8N109	375 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	OR5H2	Q8NGV7	314 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	KIR2DL5B	Q8NHK3	375 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	FCAMR	Q8WWV6	532 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	TSC22D3	Q99576	134 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	OR51B2	Q9Y5P1	312 aa		13.35	□□□□□ -0.27
GGA1-223	ENST00000491295	C15orf62	A8K5M9	175 aa		13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	GPR31	O00270	319 aa		13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	ATF4	P18848	351 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	PRSS3	P35030	304 aa		13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	CMC4	P56277	68 aa	Predicted RBP	13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	TNFRSF9	Q07011	255 aa		13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	SCARB1	Q8WTV0	552 aa		13.34	□□□□□ -0.27
GGA1-223	ENST00000491295	OR4C46	A6NHA9	309 aa		13.33	□□□□□ -0.28
GGA1-223	ENST00000491295	SPRY2	O43597	315 aa		13.33	□□□□□ -0.28
GGA1-223	ENST00000491295	PMP2	P02689	132 aa		13.33	□□□□□ -0.28
GGA1-223	ENST00000491295	RPA2	P15927	270 aa		13.33	□□□□□ -0.28
GGA1-223	ENST00000491295	TAS2R20	P59543	309 aa		13.33	□□□□□ -0.28
GGA1-223	ENST00000491295	HINT2	Q9BX68	163 aa		13.33	□□□□□ -0.28
GGA1-223	ENST00000491295	NUPR2	A6NF83	97 aa		13.32	□□□□□ -0.28
GGA1-223	ENST00000491295	G6PC	P35575	357 aa		13.32	□□□□□ -0.28
GGA1-223	ENST00000491295	RPS19	P39019	145 aa	Known RBP	13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms