RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 AP3S1Q92572 193 aa10.32□□□□□ -0.76
TRAIP-211ENST00000491060 WDR89Q96FK6 387 aaPredicted RBP10.32□□□□□ -0.76
TRAIP-211ENST00000491060 AIFM2Q9BRQ8 373 aa10.32□□□□□ -0.76
TRAIP-211ENST00000491060 MIXL1Q9H2W2 232 aa10.32□□□□□ -0.76
TRAIP-211ENST00000491060 RETNQ9HD89 108 aa10.32□□□□□ -0.76
TRAIP-211ENST00000491060 COMMD9Q9P000 198 aa10.32□□□□□ -0.76
TRAIP-211ENST00000491060 IGLV11-55A0A075B6I3 123 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 OR2T8A6NH00 312 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 CTDSP2O14595 271 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 ZNF207O43670 478 aaKnown RBP10.31□□□□□ -0.76
TRAIP-211ENST00000491060 SCAF4O95104 1147 aaKnown RBP10.31□□□□□ -0.76
TRAIP-211ENST00000491060 IGHV3-48P01763 117 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 CRYGCP07315 174 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 FOLR2P14207 255 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 WT1-ASQ06250 92 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 TM4SF20Q53R12 229 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 RNASE10Q5GAN6 216 aaKnown RBP10.31□□□□□ -0.76
TRAIP-211ENST00000491060 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 OR4D10Q8NGI6 311 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 OR1L8Q8NGR8 309 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 CD300LFQ8TDQ1 290 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 BORCS5Q969J3 196 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 MRGPRFQ96AM1 343 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 SCPEP1Q9HB40 452 aa10.31□□□□□ -0.76
TRAIP-211ENST00000491060 CD7P09564 240 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 HIST1H1BP16401 226 aaKnown RBP10.3□□□□□ -0.76
TRAIP-211ENST00000491060 S100GP29377 79 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 MFAP2P55001 183 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 UNQ9165/PRO28630Q6UXU0 137 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 H2BFWTQ7Z2G1 175 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 SLC38A6Q8IZM9 456 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 Q8N402 240 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 DEFB125Q8N687 156 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 OR4A16Q8NH70 328 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 MISP3Q96FF7 219 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 ABHD1Q96SE0 405 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
TRAIP-211ENST00000491060 IGKV1-39P01597 117 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 IGKV1D-39P04432 117 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 ALDH3B2P48448 385 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 POU2AF1Q16633 256 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 SP6Q3SY56 376 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 Q56UQ5 140 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 PLET1Q6UQ28 207 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 BTNL8Q6UX41 500 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 CMTM3Q96MX0 182 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 NEURL2Q9BR09 285 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 C20orf24Q9BUV8 137 aa10.29□□□□□ -0.76
TRAIP-211ENST00000491060 C6orf62Q9GZU0 229 aaPredicted RBP10.29□□□□□ -0.76
TRAIP-211ENST00000491060 SERPINE2P07093 398 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 CBLN1P23435 193 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 PIGPP57054 158 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 IL18Q14116 193 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 DEFB114Q30KQ6 69 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 LPCAT3Q6P1A2 487 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 GDPD1Q8N9F7 314 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 UXS1Q8NBZ7 420 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 ZNF502Q8TBZ5 544 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 MARCH1Q8TCQ1 289 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
TRAIP-211ENST00000491060 PINX1Q96BK5 328 aaKnown RBP10.28□□□□□ -0.76
TRAIP-211ENST00000491060 MLXQ9UH92 298 aa10.28□□□□□ -0.76
TRAIP-211ENST00000491060 IGHV3-49A0A0A0MS15 119 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 TMEM213A2RRL7 107 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 ZNF785A8K8V0 405 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 RAB3DO95716 219 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 AKR1C2P52895 323 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 HAGHQ16775 308 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 TRIM16LQ309B1 348 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 RNASE11Q8TAA1 199 aaKnown RBP10.27□□□□□ -0.77
TRAIP-211ENST00000491060 DIRAS2Q96HU8 199 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 CXorf58Q96LI9 332 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 TP53RKQ96S44 253 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 SRD5A3Q9H8P0 318 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 NDUFA4L2Q9NRX3 87 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 GAR1Q9NY12 217 aaKnown RBP10.27□□□□□ -0.77
TRAIP-211ENST00000491060 PRNDQ9UKY0 176 aa10.27□□□□□ -0.77
TRAIP-211ENST00000491060 CCDC160A6NGH7 325 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 C15orf61A6NNL5 157 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 TGOLN2O43493 480 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 NOL3O60936 208 aaKnown RBP10.26□□□□□ -0.77
TRAIP-211ENST00000491060 TPPPO94811 219 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 NXPH3O95157 252 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 FAM209BQ5JX69 171 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 ZNF57Q68EA5 555 aaPredicted RBP10.26□□□□□ -0.77
TRAIP-211ENST00000491060 TMEM61Q8N0U2 210 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 OR13C8Q8NGS7 320 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 SEC22AQ96IW7 307 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 CHRDL1Q9BU40 450 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 C19orf73Q9NVV2 129 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 SLC2A8Q9NY64 477 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 PRR13Q9NZ81 148 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 THYN1Q9P016 225 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 COPZ2Q9P299 210 aa10.26□□□□□ -0.77
TRAIP-211ENST00000491060 MTFP1Q9UDX5 166 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms