RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 SEC22AQ96IW7 307 aa11.59□□□□□ -0.55
COL27A1-206ENST00000490831 TSC22D3Q99576 134 aa11.59□□□□□ -0.55
COL27A1-206ENST00000490831 TMEM14BQ9NUH8 114 aa11.59□□□□□ -0.55
COL27A1-206ENST00000490831 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
COL27A1-206ENST00000490831 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.56
COL27A1-206ENST00000490831 DEFA4P12838 97 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 WT1-ASQ06250 92 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 STEAP1BQ6NZ63 245 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 OR5B3Q8NH48 314 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 TERB2Q8NHR7 220 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 DIRAS2Q96HU8 199 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 NXF2Q9GZY0 626 aaKnown RBP11.58□□□□□ -0.56
COL27A1-206ENST00000490831 FKBP11Q9NYL4 201 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 SMAD5-AS1Q9Y6J3 95 aa11.58□□□□□ -0.56
COL27A1-206ENST00000490831 TRBV7-1A0A0A6YYK4 115 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 C15orf61A6NNL5 157 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 LGALS9O00182 355 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 NOL3O60936 208 aaKnown RBP11.57□□□□□ -0.56
COL27A1-206ENST00000490831 GGCTO75223 188 aaKnown RBP11.57□□□□□ -0.56
COL27A1-206ENST00000490831 SNAPC5O75971 98 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 RAB3DO95716 219 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 SERPINE2P07093 398 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 HAPLN4Q86UW8 402 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 GPHB5Q86YW7 130 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 GDPD1Q8N9F7 314 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 LSM10Q969L4 123 aaKnown RBP11.57□□□□□ -0.56
COL27A1-206ENST00000490831 EEF1AKMT3Q96AZ1 226 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 CXorf58Q96LI9 332 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 SOSTQ9BQB4 213 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 PEMTQ9UBM1 199 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 NSG2Q9Y328 171 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 OR51B2Q9Y5P1 312 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
COL27A1-206ENST00000490831 MFSD2BA6NFX1 497 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 DBX1A6NMT0 343 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 PPP5D1E7EU14 171 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 H0Y980 276 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 GSTZ1O43708 216 aaPredicted RBP11.56□□□□□ -0.56
COL27A1-206ENST00000490831 OR13C7P0DN81 318 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 PGAM2P15259 253 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 PIGPP57054 158 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 MEF2DQ14814 521 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 C11orf87Q6NUJ2 197 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 ADAMTSL5Q6ZMM2 481 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 OR2K2Q8NGT1 345 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 ZNF502Q8TBZ5 544 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 ZFAND1Q8TCF1 268 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 MRGPRFQ96AM1 343 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 THYN1Q9P016 225 aa11.56□□□□□ -0.56
COL27A1-206ENST00000490831 P0C879 139 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 PI3P19957 117 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 ARL3P36405 182 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 IL18Q14116 193 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 CLEC19AQ6UXS0 136 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 H2BFWTQ7Z2G1 175 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 Q8N1Y9 231 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 OR13C8Q8NGS7 320 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 VN1R17PQ8TDU5 208 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 TP53RKQ96S44 253 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 ATP6V0BQ99437 205 aa11.55□□□□□ -0.56
COL27A1-206ENST00000490831 THAP7Q9BT49 309 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-206ENST00000490831 C6orf62Q9GZU0 229 aaPredicted RBP11.55□□□□□ -0.56
COL27A1-206ENST00000490831 F11RQ9Y624 299 aaKnown RBP11.55□□□□□ -0.56
COL27A1-206ENST00000490831 CYB5BO43169 146 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 B3GALNT1O75752 331 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 OR2C1O95371 312 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 IGHV3-23P01764 117 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 HLA-AP01891 365 aaKnown RBP11.54□□□□□ -0.56
COL27A1-206ENST00000490831 CTSDP07339 412 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-206ENST00000490831 TNFSF8P32971 234 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 PPP5CP53041 499 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 MFAP2P55001 183 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 SURF2Q15527 256 aaPredicted RBP11.54□□□□□ -0.56
COL27A1-206ENST00000490831 LCN12Q6JVE5 192 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 Q8N402 240 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 TMEM56Q96MV1 263 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 RSL24D1Q9UHA3 163 aaKnown RBP11.54□□□□□ -0.56
COL27A1-206ENST00000490831 S4R3C0 116 aa11.54□□□□□ -0.56
COL27A1-206ENST00000490831 C3orf85A0A1B0GTC6 90 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 ANKRD20A5PA0PJZ0 165 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 A8MWP6 167 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 A8MZ25 164 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 CLEC3BP05452 202 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 AKAIN1P0CW23 69 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 UCP1P25874 307 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 SCGB2B2Q4G0G5 96 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 CCDC71LQ8N9Z2 235 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 OR4C16Q8NGL9 310 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 OR1L6Q8NGR2 347 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 MCFD2Q8NI22 146 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 MARCH1Q8TCQ1 289 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 RBM38Q9H0Z9 239 aaKnown RBP11.53□□□□□ -0.56
COL27A1-206ENST00000490831 COPZ2Q9P299 210 aa11.53□□□□□ -0.56
COL27A1-206ENST00000490831 HUWE1Q7Z6Z7 4374 aaKnown RBP11.52□□□□□ -0.56
COL27A1-206ENST00000490831 C2orf70A6NJV1 201 aa11.52□□□□□ -0.57
COL27A1-206ENST00000490831 DISC1C4P0D8 188 aa11.52□□□□□ -0.57
COL27A1-206ENST00000490831 IGKV1-5P01602 117 aa11.52□□□□□ -0.57
COL27A1-206ENST00000490831 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms