RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 TMEM140Q9NV12 185 aa11.48□□□□□ -0.57
COL2A1-207ENST00000490609 TRAV18A0A075B6X5 111 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 CXorf65A6NEN9 183 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 ERICH4A6NGS2 130 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 OR2T8A6NH00 312 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 SERPINE2P07093 398 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 NQO2P16083 231 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 GNRHRP30968 328 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 BMI1P35226 326 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 ZNF124Q15973 351 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 RBPMS2Q6ZRY4 209 aaKnown RBP11.47□□□□□ -0.57
COL2A1-207ENST00000490609 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 VN1R17PQ8TDU5 208 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 GIMAP1Q8WWP7 306 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 SRSF8Q9BRL6 282 aaKnown RBP11.47□□□□□ -0.57
COL2A1-207ENST00000490609 SLC5A7Q9GZV3 580 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 UFC1Q9Y3C8 167 aa11.47□□□□□ -0.57
COL2A1-207ENST00000490609 IGHV3-21A0A0B4J1V1 117 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 K7EIM0 57 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 FGF2P09038 288 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 ATF4P18848 351 aaPredicted RBP11.46□□□□□ -0.57
COL2A1-207ENST00000490609 GABARAPL2P60520 117 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 GDPD1Q8N9F7 314 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 SCARB1Q8WTV0 552 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 QTRT1Q9BXR0 403 aaKnown RBP11.46□□□□□ -0.57
COL2A1-207ENST00000490609 AUNIPQ9H7T9 357 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 PLEKHA2Q9HB19 425 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 NDUFA4L2Q9NRX3 87 aa11.46□□□□□ -0.57
COL2A1-207ENST00000490609 PKD1P98161 4303 aa11.46□□□□□ -0.58
COL2A1-207ENST00000490609 NUPR2A6NF83 97 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 DBX1A6NMT0 343 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 ZNF207O43670 478 aaKnown RBP11.45□□□□□ -0.58
COL2A1-207ENST00000490609 MRPS14O60783 128 aaKnown RBP11.45□□□□□ -0.58
COL2A1-207ENST00000490609 SCGNO76038 276 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 OR13C7P0DN81 318 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 FCGR2BP31994 310 aaPredicted RBP11.45□□□□□ -0.58
COL2A1-207ENST00000490609 FXYD4P59646 89 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 ARPC4P59998 168 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 OR51H1Q8NH63 302 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
COL2A1-207ENST00000490609 KIR2DL5BA0A0G2JN68 375 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 KIR2DL5BA0A0G2JPC4 375 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 MEIS3P1A6NDR6 274 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 UBE2CO00762 179 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 DEDDO75618 318 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 CTSGP08311 255 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 TRAPPC2P0DI81 140 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 TRAPPC2BP0DI82 140 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
COL2A1-207ENST00000490609 PSMB9P28065 219 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 MXD1Q05195 221 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 DHRS11Q6UWP2 260 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 APRG1Q8IVJ8 170 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 KIR2DL5AQ8N109 375 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 KIR2DL5BQ8NHK3 375 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 AIFM2Q9BRQ8 373 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 COMMD5Q9GZQ3 224 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 DAZ1Q9NQZ3 744 aaKnown RBP11.44□□□□□ -0.58
COL2A1-207ENST00000490609 BLOC1S6Q9UL45 172 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 RAB26Q9ULW5 256 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 NSG2Q9Y328 171 aa11.44□□□□□ -0.58
COL2A1-207ENST00000490609 K7EMT4 169 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 NDUFA4O00483 81 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 CTSDP07339 412 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-207ENST00000490609 APOC4P55056 127 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 SLC25A24Q6NUK1 477 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 SLC38A6Q8IZM9 456 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 FCAMRQ8WWV6 532 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 BSCL2Q96G97 398 aaPredicted RBP11.43□□□□□ -0.58
COL2A1-207ENST00000490609 RNF2Q99496 336 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 ANAPC10Q9UM13 185 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 ETV7Q9Y603 341 aa11.43□□□□□ -0.58
COL2A1-207ENST00000490609 F11RQ9Y624 299 aaKnown RBP11.43□□□□□ -0.58
COL2A1-207ENST00000490609 DYNC1H1Q14204 4646 aaKnown RBP11.43□□□□□ -0.58
COL2A1-207ENST00000490609 PGLYRP1O75594 196 aaPredicted RBP11.42□□□□□ -0.58
COL2A1-207ENST00000490609 RFX2P48378 723 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 HSPA13P48723 471 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 SCAND1P57086 179 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 IDNKQ5T6J7 187 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 TMEM17Q86X19 198 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 CADM3Q8N126 398 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 DMBX1Q8NFW5 382 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 C21orf62Q9NYP8 219 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 THYN1Q9P016 225 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 SMPXQ9UHP9 88 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 SSR3Q9UNL2 185 aa11.42□□□□□ -0.58
COL2A1-207ENST00000490609 A0A0A6YYH2 397 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 A6NJ64 397 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 MARCH11A6NNE9 402 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 CHEK1O14757 476 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 F2RP25116 425 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 TGFBR1P36897 503 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 LPAR6P43657 344 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 PRR20EP86478 221 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 PRR20CP86479 221 aa11.41□□□□□ -0.58
COL2A1-207ENST00000490609 PRR20DP86480 221 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms