RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 S4R3C0 116 aa13.28□□□□□ -0.28
SEC13-218ENST00000490283 TEX50A0A1B0GTY4 177 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 LGALS9O00182 355 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 HLA-AP01891 365 aaKnown RBP13.27□□□□□ -0.29
SEC13-218ENST00000490283 SERPINE2P07093 398 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 MECP2P51608 486 aaKnown RBP13.27□□□□□ -0.29
SEC13-218ENST00000490283 ZNF585BQ52M93 769 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 GPHB5Q86YW7 130 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 SBSPONQ8IVN8 264 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 OR10W1Q8NGF6 305 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 OR5B3Q8NH48 314 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 RAB2BQ8WUD1 216 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 ZNF486Q96H40 463 aaPredicted RBP13.27□□□□□ -0.29
SEC13-218ENST00000490283 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 TMEM56Q96MV1 263 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 MTFP1Q9UDX5 166 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 NSG2Q9Y328 171 aa13.27□□□□□ -0.29
SEC13-218ENST00000490283 ZNF320A2RRD8 509 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 CD3DP04234 171 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 IGHV4-30-4P0DP06 118 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 TAS2R19P59542 299 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 MRPS10P82664 201 aaKnown RBP13.26□□□□□ -0.29
SEC13-218ENST00000490283 SLC25A24Q6NUK1 477 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 H2BFWTQ7Z2G1 175 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 BCL7BQ9BQE9 202 aa13.26□□□□□ -0.29
SEC13-218ENST00000490283 MFSD2BA6NFX1 497 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 C2orf70A6NJV1 201 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 CLEC3BP05452 202 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 PTBP1P26599 531 aaKnown RBP eCLIP13.25□□□□□ -0.29
SEC13-218ENST00000490283 SPCS2Q15005 226 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 PLET1Q6UQ28 207 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 OR1L6Q8NGR2 347 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 OR4A16Q8NH70 328 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 ABHD1Q96SE0 405 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 TUBA4BQ9H853 241 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 NDUFA4L2Q9NRX3 87 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 SLC2A8Q9NY64 477 aa13.25□□□□□ -0.29
SEC13-218ENST00000490283 TECRQ9NZ01 308 aaKnown RBP13.25□□□□□ -0.29
SEC13-218ENST00000490283 C15orf61A6NNL5 157 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 GABARAPH6UMI1 98 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 ATG12O94817 140 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 FOLR2P14207 255 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 GPR183P32249 361 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 TMBIM6P55061 237 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 SSBP1Q04837 148 aaKnown RBP13.24□□□□□ -0.29
SEC13-218ENST00000490283 WT1-ASQ06250 92 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 CD300EQ496F6 205 aaPredicted RBP13.24□□□□□ -0.29
SEC13-218ENST00000490283 SCGB2B2Q4G0G5 96 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 LAX1Q8IWV1 398 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 Q8N1Y9 231 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 CCDC71LQ8N9Z2 235 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 TMEM229BQ8NBD8 167 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 ZFAND1Q8TCF1 268 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 PALMDQ9NP74 551 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 CCDC59Q9P031 241 aaKnown RBP13.24□□□□□ -0.29
SEC13-218ENST00000490283 RABL2AQ9UBK7 228 aaPredicted RBP13.24□□□□□ -0.29
SEC13-218ENST00000490283 RABL2BQ9UNT1 228 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 DMRT1Q9Y5R6 373 aa13.24□□□□□ -0.29
SEC13-218ENST00000490283 F11RQ9Y624 299 aaKnown RBP13.24□□□□□ -0.29
SEC13-218ENST00000490283 A8MZ25 164 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 RAB3DO95716 219 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 PPP5CP53041 499 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 PIGPP57054 158 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 RND3P61587 244 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 MRGPRFQ96AM1 343 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 RCHY1Q96PM5 261 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 MIXL1Q9H2W2 232 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 ZC4H2Q9NQZ6 224 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 TMEM14BQ9NUH8 114 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 COPZ2Q9P299 210 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 DNAH9Q9NYC9 4486 aa13.23□□□□□ -0.29
SEC13-218ENST00000490283 IZUMO1RA6ND01 250 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 A8MWP6 167 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 CTDSP2O14595 271 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 RPL5P46777 297 aaKnown RBP13.22□□□□□ -0.29
SEC13-218ENST00000490283 CD81P60033 236 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 IL18Q14116 193 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 MEF2DQ14814 521 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 GUCA2BQ16661 112 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 DEFB114Q30KQ6 69 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 STEAP1BQ6NZ63 245 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 LHFPL1Q86WI0 220 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 TERB2Q8NHR7 220 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 DIRAS2Q96HU8 199 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 SEC22AQ96IW7 307 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 UFC1Q9Y3C8 167 aa13.22□□□□□ -0.29
SEC13-218ENST00000490283 CD74P04233 296 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 PI3P19957 117 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 CBLN1P23435 193 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 AKR1C2P52895 323 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 TRIM16LQ309B1 348 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 MARC2Q969Z3 335 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 BSCL2Q96G97 398 aaPredicted RBP13.21□□□□□ -0.29
SEC13-218ENST00000490283 C6orf62Q9GZU0 229 aaPredicted RBP13.21□□□□□ -0.29
SEC13-218ENST00000490283 C19orf73Q9NVV2 129 aa13.21□□□□□ -0.29
SEC13-218ENST00000490283 COL7A1Q02388 2944 aa13.21□□□□□ -0.3
SEC13-218ENST00000490283 C3orf85A0A1B0GTC6 90 aa13.2□□□□□ -0.3
SEC13-218ENST00000490283 DISC1C4P0D8 188 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms