RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PSMF1Q92530 271 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SFRP2Q96HF1 295 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 BTF3L4Q96K17 158 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 POM121L2Q96KW2 1035 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 AQP10Q96PS8 301 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SMIM3Q9BZL3 60 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 RPP21Q9H633 154 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 ISG20L2Q9H9L3 353 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 OCIAD1Q9NX40 245 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF107Q9UII5 783 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 V9GYY9 64 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 TRBV6-7A0A0A0MS04 114 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF736B4DX44 427 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 LOC730098B7Z3J9 87 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 C5orf67F2Z3F1 127 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SOCS1O15524 211 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CATP04040 527 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CD99P14209 185 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CSNK2A2P19784 350 aaPredicted RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 KLK2P20151 261 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 FUT3P21217 361 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CD38P28907 300 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CTRLP40313 264 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 LAMTOR4Q0VGL1 99 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 NSDHLQ15738 373 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 PWWP2BQ6NUJ5 590 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 RPL22L1Q6P5R6 122 aaKnown RBP2.15□□□□□ -2.07
UBXN4-208ENST00000490163 DPPA3Q6W0C5 159 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 GKN2Q86XP6 184 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 CHST4Q8NCG5 386 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 NUP37Q8NFH4 326 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 OR52L1Q8NGH7 329 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 OR1N2Q8NGR9 330 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 OR2T6Q8NHC8 308 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 VN1R17PQ8TDU5 208 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 PTH2Q96A98 100 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SLC35G5Q96KT7 338 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 PGLYRP4Q96LB8 373 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 SIGMAR1Q99720 223 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 NMES1Q9C002 83 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 PLEKHJ1Q9NW61 149 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 DPM3Q9P2X0 92 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 ARL5AQ9Y689 179 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 WSB1Q9Y6I7 421 aa2.15□□□□□ -2.07
UBXN4-208ENST00000490163 IGHV1-69-2A0A0G2JMI3 117 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 MAP1LC3B2A6NCE7 125 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 RBFOX3A6NFN3 312 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 E9PLD3 99 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 J3QR89 54 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 PDE6DO43924 150 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 HAND1O96004 215 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 LGALS7P47929 136 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 RND2P52198 227 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 SNRPD1P62314 119 aaKnown RBP2.14□□□□□ -2.07
UBXN4-208ENST00000490163 PAFAH1B2P68402 229 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 TMEM267Q0VDI3 215 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-208ENST00000490163 PPP1R1AQ13522 171 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 ELOCQ15369 112 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 MPV17LQ2QL34 196 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 MORN2Q502X0 79 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 SPATA45Q537H7 98 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 IGFL2Q6UWQ7 119 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 TEX43Q6ZNM6 134 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 TGIF2LYQ8IUE0 185 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF584Q8IVC4 421 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 OR4P4Q8NGL7 312 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 CMTM2Q8TAZ6 248 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 GPR146Q96CH1 333 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 STARD4Q96DR4 205 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 OR10C1Q96KK4 312 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 MAP1LC3BQ9GZQ8 125 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 TMEM106BQ9NUM4 274 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 FUT9Q9Y231 359 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 F11RQ9Y624 299 aaKnown RBP2.14□□□□□ -2.07
UBXN4-208ENST00000490163 A0A1B0GW64 132 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 OR4C45A6NMZ5 311 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 FAM72CH0Y354 149 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 NPIPB7O75200 414 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 CNIH1O95406 144 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 CDS2O95674 445 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 CTSDP07339 412 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-208ENST00000490163 ESDP10768 282 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 HTR1DP28221 377 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 RPL12P30050 165 aaKnown RBP2.14□□□□□ -2.07
UBXN4-208ENST00000490163 GABRA3P34903 492 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 BIDP55957 195 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 LINC01547P58512 204 aaPredicted RBP2.14□□□□□ -2.07
UBXN4-208ENST00000490163 FXYD6P3P58550 94 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 LCN6P62502 163 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 ADIGQ0VDE8 80 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 HIST3H3Q16695 136 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 ZNF718Q3SXZ3 478 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 FAM72AQ5TYM5 149 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 FAM72DQ6L9T8 149 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 TCF24Q7RTU0 167 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 SLC25A42Q86VD7 318 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 FAM72BQ86X60 149 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 OR8I2Q8N0Y5 310 aa2.14□□□□□ -2.07
UBXN4-208ENST00000490163 ZDHHC22Q8N966 263 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms