RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.21
LSAMP-205ENST00000490035 CD300CQ08708 224 aa7.52□□□□□ -1.21
LSAMP-205ENST00000490035 ZNF56Q15929 161 aa7.52□□□□□ -1.21
LSAMP-205ENST00000490035 DUX5Q96PT3 197 aa7.52□□□□□ -1.21
LSAMP-205ENST00000490035 REPIN1Q9BWE0 567 aaKnown RBP7.52□□□□□ -1.21
LSAMP-205ENST00000490035 IFITM3Q01628 133 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 WDYHV1Q96HA8 205 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 KBTBD11-OT1A0A1B0GTJ5 212 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 CEACAM4O75871 244 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 PVRIGQ6DKI7 326 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 WFDC3Q8IUB2 231 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 SDHCQ99643 169 aaPredicted RBP7.51□□□□□ -1.21
LSAMP-205ENST00000490035 IFI27L2Q9H2X8 130 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 TMEM242Q9NWH2 141 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 HCP5Q6MZN7 132 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 RGP1Q92546 391 aaPredicted RBP7.51□□□□□ -1.21
LSAMP-205ENST00000490035 SSBP3Q9BWW4 388 aaPredicted RBP7.51□□□□□ -1.21
LSAMP-205ENST00000490035 IGKV1D-42A0A075B6H8 117 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 GREM1O60565 184 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 NUP37Q8NFH4 326 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 SPSB2Q99619 263 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 IGLV3-32A0A0A0MS00 114 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 PEX7O00628 323 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 LINC00587B1AMM8 73 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 F2Z2F3 143 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 ZNF708P17019 499 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 SRSF5Q13243 272 aaKnown RBP7.51□□□□□ -1.21
LSAMP-205ENST00000490035 LINC00114Q6XXX2 140 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 ATP5L2Q7Z4Y8 100 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 MS4A3Q96HJ5 214 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 IZUMO1RA6ND01 250 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 ZNF205O95201 554 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
LSAMP-205ENST00000490035 TMEM262E9PQX1 116 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 CEACAM1P13688 526 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 EFNB1P98172 346 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 GOLT1AQ6ZVE7 132 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 CENPVQ7Z7K6 275 aaPredicted RBP7.5□□□□□ -1.21
LSAMP-205ENST00000490035 TTC9CQ8N5M4 171 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
LSAMP-205ENST00000490035 YAE1D1Q9NRH1 226 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 PIN1P1O15428 100 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 DTX2Q86UW9 622 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 OTORQ9NRC9 128 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 SPANXA1Q9NS26 97 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 A8MXK9 166 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 THY1P04216 161 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 MBNL2Q5VZF2 373 aaKnown RBP7.5□□□□□ -1.21
LSAMP-205ENST00000490035 RCC1LQ96I51 464 aaKnown RBP7.5□□□□□ -1.21
LSAMP-205ENST00000490035 TMEM106BQ9NUM4 274 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 IGLV3-12A0A075B6K2 115 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 A0A1W2PP11 408 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 A0A1W2PRD5 423 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 A0A1W2PRF3 423 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 A0A1W2PRM7 423 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 ATP5J2P56134 94 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 OR10J3Q5JRS4 329 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 CHCHD2Q9Y6H1 151 aaPredicted RBP7.5□□□□□ -1.21
LSAMP-205ENST00000490035 CCL1P22362 96 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 RFLNBQ8N5W9 214 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 SRXN1Q9BYN0 137 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
LSAMP-205ENST00000490035 ZDBF2Q9HCK1 2354 aa7.5□□□□□ -1.21
LSAMP-205ENST00000490035 J3KRW8 73 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 DUSP14O95147 198 aaKnown RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 GNB1LQ9BYB4 327 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 MOSP00540 346 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 IGFBP3P17936 291 aaPredicted RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 SLC25A2Q9BXI2 301 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 RPRMQ9NS64 109 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 MRPL16Q9NX20 251 aaKnown RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 H0YL77 283 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 CSRP2Q16527 193 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 NPIPB3Q92617 1050 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 SLC25A20O43772 301 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 ARPC1AQ92747 370 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 SPAARA0A1B0GVQ0 90 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 SP9P0CG40 484 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 APELAP0DMC3 54 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 CCL20P78556 96 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 CNOT1A5YKK6 2376 aaKnown RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 MEX3AA1L020 520 aaKnown RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 LEPP41159 167 aa7.49□□□□□ -1.21
LSAMP-205ENST00000490035 ACSF3Q4G176 576 aaPredicted RBP7.49□□□□□ -1.21
LSAMP-205ENST00000490035 IL6RP08887 468 aaPredicted RBP7.48□□□□□ -1.21
LSAMP-205ENST00000490035 HOXA5P20719 270 aa7.48□□□□□ -1.21
LSAMP-205ENST00000490035 ORMDL2Q53FV1 153 aa7.48□□□□□ -1.21
LSAMP-205ENST00000490035 OR4X2Q8NGF9 303 aa7.48□□□□□ -1.21
LSAMP-205ENST00000490035 C21orf62Q9NYP8 219 aa7.48□□□□□ -1.21
LSAMP-205ENST00000490035 SMPXQ9UHP9 88 aa7.48□□□□□ -1.21
LSAMP-205ENST00000490035 IGKV3D-11A0A0A0MRZ8 115 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms