RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ELOBQ15370 118 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 GUK1Q16774 197 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 IMPG1Q17R60 797 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 CCDC153Q494R4 210 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 HACD4Q5VWC8 232 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 RASSF6Q6ZTQ3 369 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 SMIM15Q7Z3B0 74 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 TAC4Q86UU9 113 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 SLC51BQ86UW2 128 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 GID4Q8IVV7 300 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.67□□□□□ -2.3
CCDC39-206ENST00000489868 LFNGQ8NES3 379 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 OR5B17Q8NGF7 314 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 FAM172AQ8WUF8 416 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 PYDC1Q8WXC3 89 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 AP3S1Q92572 193 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 DGCR14Q96DF8 476 aaKnown RBP0.67□□□□□ -2.3
CCDC39-206ENST00000489868 CMTM5Q96DZ9 223 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 CCDC42Q96M95 316 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 PACRGQ96M98 296 aaPredicted RBP0.67□□□□□ -2.3
CCDC39-206ENST00000489868 CGREF1Q99674 301 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 SLC22A4Q9H015 551 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 WDR54Q9H977 334 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 PARVBQ9HBI1 364 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 HRASLSQ9HDD0 168 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 C19orf12Q9NSK7 152 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 PLEKHJ1Q9NW61 149 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 SLC22A13Q9Y226 551 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 A0A1W2PP64 1363 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 MTUS2Q5JR59 1369 aa0.67□□□□□ -2.3
CCDC39-206ENST00000489868 SMARCA2P51531 1590 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 NCOA6Q14686 2063 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 GREB1Q4ZG55 1949 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 H0Y980 276 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 M0QZ92 97 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 CCRL2O00421 344 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 KPNA3O00505 521 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ACOX3O15254 700 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SLC16A4O15374 487 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 TGOLN2O43493 480 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ATP8B1O43520 1251 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 DHFRP00374 187 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SERPINA1P01009 418 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ORM1P02763 201 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SERPINB1P30740 379 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 OMPP47874 163 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SPCS3P61009 180 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 PSME3P61289 254 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ERVS71-1P61550 626 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 LSM6P62312 80 aaKnown RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 RPS24P62847 133 aaKnown RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 HLA-DRB3P79483 266 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SMCO1Q147U7 214 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SPCS2Q15005 226 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SPA17Q15506 151 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 TAF1AQ15573 450 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 DEFB115Q30KQ5 88 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 CCDC58Q4VC31 144 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 AKIRIN2Q53H80 203 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 OGFRL1Q5TC84 451 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SDHAF4Q5VUM1 108 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 LPCAT4Q643R3 524 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 LRRN1Q6UXK5 716 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 S100A7AQ86SG5 101 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 CLVS1Q8IUQ0 354 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 TRAPPC5Q8IUR0 188 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 Q8N402 240 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM156Q8N614 296 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 TMEM251Q8N6I4 163 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 PIGXQ8TBF5 258 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 NEK7Q8TDX7 302 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 RASSF5Q8WWW0 418 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 LZICQ8WZA0 190 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 PTH2Q96A98 100 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 RMND5BQ96G75 393 aaPredicted RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 PRRT1Q99946 306 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 MRPS26Q9BYN8 205 aaKnown RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 CHST6Q9GZX3 395 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 TRABDQ9H4I3 376 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 FGFR1OP2Q9NVK5 253 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 GID8Q9NWU2 228 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 CMTM6Q9NX76 183 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 NAT8Q9UHE5 227 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 GUCA1BQ9UMX6 200 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 GINS2Q9Y248 185 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ERGIC3Q9Y282 383 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ARL2BPQ9Y2Y0 163 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 SMARCA4P51532 1647 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ROCK2O75116 1388 aaKnown RBP0.66□□□□□ -2.3
CCDC39-206ENST00000489868 CPDO75976 1380 aa0.66□□□□□ -2.3
CCDC39-206ENST00000489868 ZFYVE9O95405 1425 aa0.65□□□□□ -2.3
CCDC39-206ENST00000489868 ADGRL3Q9HAR2 1447 aa0.65□□□□□ -2.3
CCDC39-206ENST00000489868 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.65□□□□□ -2.31
CCDC39-206ENST00000489868 A0A1B0GV72 72 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 TMEM269A0A1B0GVZ9 245 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 MEIS3P1A6NDR6 274 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 EFCAB10A6NFE3 127 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 OR51F1A6NGY5 319 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 C21orf140B9A014 251 aa0.65□□□□□ -2.31
CCDC39-206ENST00000489868 FTCDNL1E5RQL4 147 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms