RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 KBTBD11O94819 623 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 HPRT1P00492 218 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 NQO2P16083 231 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 NFYAP23511 347 aaPredicted RBP5.35□□□□□ -1.55
COL9A1-209ENST00000489861 FCGR2CP31995 323 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 ARL3P36405 182 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 MFAP2P55001 183 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 ELLP55199 621 aaPredicted RBP5.35□□□□□ -1.55
COL9A1-209ENST00000489861 TAS2R31P59538 309 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 RPL8P62917 257 aaKnown RBP5.35□□□□□ -1.55
COL9A1-209ENST00000489861 MXD1Q05195 221 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 C15orf32Q32M92 178 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 ZNF57Q68EA5 555 aaPredicted RBP5.35□□□□□ -1.55
COL9A1-209ENST00000489861 LAMTOR1Q6IAA8 161 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 RBPMS2Q6ZRY4 209 aaKnown RBP5.35□□□□□ -1.55
COL9A1-209ENST00000489861 NR2C2APQ86WQ0 139 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 GPHB5Q86YW7 130 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 MFSD4AQ8N468 514 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 TSPAN14Q8NG11 270 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 OR5AP2Q8NGF4 316 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 OR52B4Q8NGK2 314 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 OR1L6Q8NGR2 347 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 OR13F1Q8NGS4 319 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 TMEM167AQ8TBQ9 72 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 C15orf40Q8WUR7 153 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 NUDCD2Q8WVJ2 157 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 GIMAP1Q8WWP7 306 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 AP3S1Q92572 193 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 WDR89Q96FK6 387 aaPredicted RBP5.35□□□□□ -1.55
COL9A1-209ENST00000489861 COMMD5Q9GZQ3 224 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 SLC5A7Q9GZV3 580 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 ZC4H2Q9NQZ6 224 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 SLC2A9Q9NRM0 540 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 BET1LQ9NYM9 111 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 UFC1Q9Y3C8 167 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 SMIM30A4D0T7 59 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 C2orf70A6NJV1 201 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 LINC00473A8K010 186 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 J3QRK9 145 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 OR2J3O76001 311 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 PPYP01298 95 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 TRBV12-3P01733 135 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 FOLR2P14207 255 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 EDN2P20800 178 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 PJVKQ0ZLH3 352 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 PLA2G7Q13093 441 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 TMEM69Q5SWH9 247 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 MZT2AQ6P582 158 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 SECTM1Q8WVN6 248 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 MFFQ9GZY8 342 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 AUNIPQ9H7T9 357 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 ZNF430Q9H8G1 570 aaPredicted RBP5.34□□□□□ -1.55
COL9A1-209ENST00000489861 HRASLSQ9HDD0 168 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 FKBP11Q9NYL4 201 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 COMMD9Q9P000 198 aa5.34□□□□□ -1.55
COL9A1-209ENST00000489861 MRPL27Q9P0M9 148 aaKnown RBP5.34□□□□□ -1.55
COL9A1-209ENST00000489861 IGHV4-4A0A075B6R2 117 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 IGKV1D-8A0A087WSZ0 117 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF320A2RRD8 509 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 A6NJY4 79 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SRRM4A7MD48 611 aaKnown RBP5.33□□□□□ -1.56
COL9A1-209ENST00000489861 BMPR1BO00238 502 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SSX5O60225 188 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SCGB2A1O75556 95 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SNAPC5O75971 98 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 CD5P06127 495 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 CRYGCP07315 174 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 ZNF735P0CB33 412 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 APELAP0DMC3 54 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 HLA-GP17693 338 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 PSMB6P28072 239 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 PRSS3P35030 304 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 DEFB114Q30KQ6 69 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 Q5VSD8 79 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 AADACL3Q5VUY0 350 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SPSB3Q6PJ21 355 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 PLET1Q6UQ28 207 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 IDO2Q6ZQW0 420 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 TMEM17Q86X19 198 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SPAG16Q8N0X2 631 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 PUSL1Q8N0Z8 303 aaKnown RBP5.33□□□□□ -1.56
COL9A1-209ENST00000489861 CADM3Q8N126 398 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 DMBX1Q8NFW5 382 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 OR5H2Q8NGV7 314 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 OR6F1Q8NGZ6 308 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 CYYR1Q96J86 154 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 TSC22D3Q99576 134 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SPAG8Q99932 426 aaPredicted RBP5.33□□□□□ -1.56
COL9A1-209ENST00000489861 PLEKHA2Q9HB19 425 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SCPEP1Q9HB40 452 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 FAM212BQ9NTI7 297 aaPredicted RBP5.33□□□□□ -1.56
COL9A1-209ENST00000489861 TAS2R8Q9NYW2 309 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 EHFQ9NZC4 300 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 SELENOKQ9Y6D0 94 aa5.33□□□□□ -1.56
COL9A1-209ENST00000489861 LRP1Q07954 4544 aaKnown RBP5.33□□□□□ -1.56
COL9A1-209ENST00000489861 OR4C46A6NHA9 309 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 SULT1C2O00338 296 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 ATG12O94817 140 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 APOA1P02647 267 aa5.32□□□□□ -1.56
COL9A1-209ENST00000489861 EIF4EP06730 217 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms