RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 FAM90A5PA8MXJ8 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A23PA8MXZ1 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 E9PLN8 166 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 RER1O15258 196 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SIVA1O15304 175 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SPRY1O43609 319 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SPINK4O60575 86 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 OR2J3O76001 311 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CLPSP04118 112 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 LIPFP07098 398 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CISD3P0C7P0 127 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A15PP0C7V4 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A13PP0C7W8 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A14PP0C7W9 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM90A24PP0C7X0 464 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 STAG3L2P0CL84 134 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 PSG2P11465 335 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CCL2P13500 99 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 MALP21145 153 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 PLA2G5P39877 138 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 KIR2DS4P43632 304 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 RPL31P62899 125 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 GAGE5Q13069 117 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 GAGE6Q13070 117 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 GPM6BQ13491 265 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 KIR2DS1Q14954 304 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CCL14Q16627 93 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CR1LQ2VPA4 569 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CEACAM21Q3KPI0 293 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 PIGYQ3MUY2 71 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF718Q3SXZ3 478 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 RNASEKQ6P5S7 137 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 INO80CQ6PI98 192 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SLC23A3Q6PIS1 610 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 ADAMTSL5Q6ZMM2 481 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 MOB1BQ7L9L4 216 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 KIR3DL3Q8N743 410 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 TSTD1Q8NFU3 115 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 OR4A16Q8NH70 328 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 OR1L1Q8NH94 360 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM131CQ96AQ9 280 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CLDN23Q96B33 292 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 CHCHD1Q96BP2 118 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 GRAMD2BQ96HH9 432 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 GPR82Q96P67 336 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 GPHA2Q96T91 129 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 C19orf73Q9NVV2 129 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 MED29Q9NX70 200 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SIGLEC8Q9NYZ4 499 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 TECRQ9NZ01 308 aaKnown RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 TP73-AS1Q9UF72 201 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 C19orf25Q9UFG5 118 aaPredicted RBP3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 ERG28Q9UKR5 140 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 PSG8Q9UQ74 426 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 SLC17A4Q9Y2C5 497 aa3.96□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A0J9YY10 115 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1B0GX78 115 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 C5orf63A6NC05 138 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 HELTA6NFD8 242 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 FRG2CA6NGY1 282 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 LEPROTL1O95214 131 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1-39P01597 117 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1-5P01602 117 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGLV1-40P01703 118 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1D-39P04432 117 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CLEC3BP05452 202 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CA3P07451 260 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 SCTP09683 121 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 P2RY2P41231 377 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 UQCRFS1P47985 274 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 RBM11P57052 281 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CLRN1P58418 232 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 HERV-K104P63124 156 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 TFF3Q07654 80 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 AESQ08117 197 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 PLCXD2Q0VAA5 305 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IZUMO4Q1ZYL8 232 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 TIGITQ495A1 244 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM120AOSQ5T036 256 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM69BQ5VUD6 431 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 LCNL1Q6ZST4 164 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 RD3Q7Z3Z2 195 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 BCL6BQ8N143 479 aaPredicted RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF645Q8N7E2 425 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 OR4X2Q8NGF9 303 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 H1FXQ92522 213 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 VGLL1Q99990 258 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 MAP1LC3CQ9BXW4 147 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 NXF5Q9H1B4 397 aaKnown RBP3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 MTCH1Q9NZJ7 389 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 CCL26Q9Y258 94 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 OR2W1Q9Y3N9 320 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 ADAMTS9Q9P2N4 1935 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 COL4A6Q14031 1691 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1-27A0A075B6S5 117 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 IGKV1-12A0A0C4DH73 117 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 C21orf140B9A014 251 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 SLC31A1O15431 190 aa3.95□□□□□ -1.78
SNRNP40-206ENST00000489853 PRKNO60260 465 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms