RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 RPS16P62249 146 aaKnown RBP12.22□□□□□ -0.45
COL9A1-208ENST00000489611 S100A12P80511 92 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 FABP9Q0Z7S8 132 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 FBXL19-AS1Q494R0 122 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 C2orf83Q53S99 150 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 TMEM200BQ69YZ2 307 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 PDPNQ86YL7 162 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 IQCF2Q8IXL9 164 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 OR1L8Q8NGR8 309 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 TMEM170AQ8WVE7 144 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 CCL17Q92583 94 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 NEUROG1Q92886 237 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 FAM210BQ96KR6 192 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 DOK5Q9P104 306 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 ARL2-SNX15V9GYD0 113 aa12.22□□□□□ -0.45
COL9A1-208ENST00000489611 TRBV23-1A0A0A0MS06 115 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 MMP23AO75900 390 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 YIF1AO95070 293 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 CD3EP07766 207 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 USF1P22415 310 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-208ENST00000489611 CA7P43166 264 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 ZNF137PP52743 207 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 KIAA0141Q14154 515 aaPredicted RBP12.21□□□□□ -0.45
COL9A1-208ENST00000489611 ADIRFQ15847 76 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 ZNF674Q2M3X9 581 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 OR4C13Q8NGP0 309 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 TNFRSF14Q92956 283 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 CHODLQ9H9P2 273 aa12.21□□□□□ -0.45
COL9A1-208ENST00000489611 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.46
COL9A1-208ENST00000489611 CLN5O75503 358 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 EIF3GO75821 320 aaKnown RBP eCLIP12.21□□□□□ -0.46
COL9A1-208ENST00000489611 CXCL1P09341 107 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 MC5RP33032 325 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 B2MP61769 119 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 UTF1Q5T230 341 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 CACNG8Q8WXS5 425 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 RPUSD4Q96CM3 377 aaKnown RBP12.21□□□□□ -0.46
COL9A1-208ENST00000489611 FLYWCH2Q96CP2 140 aaKnown RBP12.21□□□□□ -0.46
COL9A1-208ENST00000489611 SLC35E1Q96K37 410 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 OR5B12Q96R08 314 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 URGCP-MRPS24S4R325 110 aa12.21□□□□□ -0.46
COL9A1-208ENST00000489611 TPRP12270 2363 aaKnown RBP12.21□□□□□ -0.46
COL9A1-208ENST00000489611 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-208ENST00000489611 IGKV1-16P04430 117 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 IL3RAP26951 378 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 RPL23P62829 140 aaKnown RBP12.2□□□□□ -0.46
COL9A1-208ENST00000489611 ARSJQ5FYB0 599 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-208ENST00000489611 ZNF343Q6P1L6 599 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 TGIF2LYQ8IUE0 185 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 PNKDQ8N490 385 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 OR10X1Q8NGY0 326 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 OR9G1Q8NH87 305 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 SSX3Q99909 188 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 COMMD5Q9GZQ3 224 aa12.2□□□□□ -0.46
COL9A1-208ENST00000489611 PKD1L2Q7Z442 2459 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 IGHV1-69-2A0A0G2JMI3 117 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 TEX50A0A1B0GTY4 177 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 A0A1W2PN81 502 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 E7EQL1 145 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 H0YJW9 148 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 CCL21O00585 134 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PPP1R2P9O14990 202 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 SAA1P0DJI8 122 aaPredicted RBP12.19□□□□□ -0.46
COL9A1-208ENST00000489611 CHRNA7P36544 502 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 SSX2Q16385 188 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 H1FXQ92522 213 aaKnown RBP12.19□□□□□ -0.46
COL9A1-208ENST00000489611 HARBI1Q96MB7 349 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PYGO2Q9BRQ0 406 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 NBEAQ8NFP9 2946 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 TGIF2-C20orf24A0A0A6YYL0 155 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 H7BYZ3 331 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PRR20EP86478 221 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PRR20CP86479 221 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PRR20DP86480 221 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PRR20BP86481 221 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 PRR20AP86496 221 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 MIC13Q5XKP0 118 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 MRPL41Q8IXM3 137 aaKnown RBP12.19□□□□□ -0.46
COL9A1-208ENST00000489611 DMRTC2Q8IXT2 367 aaPredicted RBP12.19□□□□□ -0.46
COL9A1-208ENST00000489611 STPG3Q8N7X2 389 aa12.19□□□□□ -0.46
COL9A1-208ENST00000489611 YLPM1P49750 1951 aaKnown RBP12.19□□□□□ -0.46
COL9A1-208ENST00000489611 ITPR1Q14643 2758 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 ICE1Q9Y2F5 2266 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 ELOA3CA0A087WX78 387 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-208ENST00000489611 DVL1O14640 695 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 HOXA5P20719 270 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 GPX4P36969 197 aaPredicted RBP12.18□□□□□ -0.46
COL9A1-208ENST00000489611 SRP14P37108 136 aaKnown RBP12.18□□□□□ -0.46
COL9A1-208ENST00000489611 RPL8P62917 257 aaKnown RBP12.18□□□□□ -0.46
COL9A1-208ENST00000489611 TMEM155Q4W5P6 130 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 TMEM167AQ8TBQ9 72 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 HINT2Q9BX68 163 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 MRPL20Q9BYC9 149 aaKnown RBP12.18□□□□□ -0.46
COL9A1-208ENST00000489611 WASHC3Q9Y3C0 194 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 RELNP78509 3460 aa12.18□□□□□ -0.46
COL9A1-208ENST00000489611 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms