RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 FGF2P09038 288 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 RPA2P15927 270 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 BMI1P35226 326 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 APOC4P55056 127 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 SCAND1P57086 179 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 DEFB135Q30KP9 77 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 Q6ZWC4 215 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 SLC38A6Q8IZM9 456 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 GDPD1Q8N9F7 314 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 VN1R17PQ8TDU5 208 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 FCGR1BQ92637 280 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 QTRT1Q9BXR0 403 aaKnown RBP9.2□□□□□ -0.94
CPSF3-204ENST00000489403 COMMD5Q9GZQ3 224 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 RNF167Q9H6Y7 350 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 RAB26Q9ULW5 256 aa9.2□□□□□ -0.94
CPSF3-204ENST00000489403 OR2T8A6NH00 312 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 SPRY2O43597 315 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 MXD1Q05195 221 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 WT1-ASQ06250 92 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 ODF3L2Q3SX64 289 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 AADACL3Q5VUY0 350 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 THOC7Q6I9Y2 204 aaKnown RBP9.19□□□□□ -0.94
CPSF3-204ENST00000489403 CEMP1Q6PRD7 247 aaPredicted RBP9.19□□□□□ -0.94
CPSF3-204ENST00000489403 TMEM17Q86X19 198 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 DMBX1Q8NFW5 382 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 GIMAP1Q8WWP7 306 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 PLEKHA2Q9HB19 425 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
CPSF3-204ENST00000489403 COMMD9Q9P000 198 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 ETV7Q9Y603 341 aa9.19□□□□□ -0.94
CPSF3-204ENST00000489403 A0A0A6YYH2 397 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 IGHV3-21A0A0B4J1V1 117 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 TEX50A0A1B0GTY4 177 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 MEIS3P1A6NDR6 274 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 A6NJ64 397 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 F8W735 103 aaPredicted RBP9.18□□□□□ -0.94
CPSF3-204ENST00000489403 UBE2CO00762 179 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 SERPINE2P07093 398 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 TRAPPC2P0DI81 140 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 TRAPPC2BP0DI82 140 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 GNRHRP30968 328 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 MFAP2P55001 183 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 IDNKQ5T6J7 187 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 SLC25A24Q6NUK1 477 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 OR5AP2Q8NGF4 316 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 CD300LFQ8TDQ1 290 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 BSCL2Q96G97 398 aaPredicted RBP9.18□□□□□ -0.94
CPSF3-204ENST00000489403 CHRDL1Q9BU40 450 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 AUNIPQ9H7T9 357 aa9.18□□□□□ -0.94
CPSF3-204ENST00000489403 IGHV3OR16-8A0A075B7F1 116 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 KIR2DL5BA0A0G2JN68 375 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 KIR2DL5BA0A0G2JPC4 375 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 MARCH11A6NNE9 402 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 NDUFA4O00483 81 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 CYB5BO43169 146 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 ATF4P18848 351 aaPredicted RBP9.17□□□□□ -0.94
CPSF3-204ENST00000489403 LAMTOR1Q6IAA8 161 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 SPSB3Q6PJ21 355 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 HSD17B13Q7Z5P4 300 aaPredicted RBP9.17□□□□□ -0.94
CPSF3-204ENST00000489403 KIR2DL5AQ8N109 375 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 OR1L8Q8NGR8 309 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 LSM10Q969L4 123 aaKnown RBP9.17□□□□□ -0.94
CPSF3-204ENST00000489403 RNF183Q96D59 192 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 NDUFA4L2Q9NRX3 87 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 C21orf62Q9NYP8 219 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 NSG2Q9Y328 171 aa9.17□□□□□ -0.94
CPSF3-204ENST00000489403 F11RQ9Y624 299 aaKnown RBP9.17□□□□□ -0.94
CPSF3-204ENST00000489403 K7EIM0 57 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 ZNF207O43670 478 aaKnown RBP9.16□□□□□ -0.94
CPSF3-204ENST00000489403 RLN1P04808 185 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
CPSF3-204ENST00000489403 ADMP35318 185 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 CBX5P45973 191 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 HERV-K104P61576 105 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 ERVK-16P61578 105 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 STPG3Q8N7X2 389 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 UBAC2Q8NBM4 344 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 SCARB1Q8WTV0 552 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 ATP6V0BQ99437 205 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 C20orf24Q9BUV8 137 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 DIABLOQ9NR28 239 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 EHFQ9NZC4 300 aa9.16□□□□□ -0.94
CPSF3-204ENST00000489403 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 OR4C46A6NHA9 309 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 K7EMT4 169 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 PGLYRP1O75594 196 aaPredicted RBP9.15□□□□□ -0.94
CPSF3-204ENST00000489403 CTSDP07339 412 aaPredicted RBP9.15□□□□□ -0.94
CPSF3-204ENST00000489403 F2RP25116 425 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
CPSF3-204ENST00000489403 G6PCP35575 357 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 FCAMRQ8WWV6 532 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 BORCS5Q969J3 196 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 MOB3AQ96BX8 217 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 GALNT14Q96FL9 552 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 ZNF2Q9BSG1 426 aaPredicted RBP9.15□□□□□ -0.94
CPSF3-204ENST00000489403 HINT2Q9BX68 163 aa9.15□□□□□ -0.94
CPSF3-204ENST00000489403 MAP6D1Q9H9H5 199 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms