RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RNASE10Q5GAN6 216 aaKnown RBP18.95■□□□□ 0.62
HMGN1-217ENST00000489072 LHFPL1Q86WI0 220 aa18.95■□□□□ 0.62
HMGN1-217ENST00000489072 THAP7Q9BT49 309 aaPredicted RBP18.95■□□□□ 0.62
HMGN1-217ENST00000489072 DBX1A6NMT0 343 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 RGS5O15539 181 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 OR13C7P0DN81 318 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 THOC7Q6I9Y2 204 aaKnown RBP18.94■□□□□ 0.62
HMGN1-217ENST00000489072 GDPD1Q8N9F7 314 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 OR4D10Q8NGI6 311 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 SEC22AQ96IW7 307 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 HINT2Q9BX68 163 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 OR51B2Q9Y5P1 312 aa18.94■□□□□ 0.62
HMGN1-217ENST00000489072 SNAPC5O75971 98 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 IFNA6P05013 189 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 SERPINE2P07093 398 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 IGHV4-30-4P0DP06 118 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 LCN12Q6JVE5 192 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 GPHB5Q86YW7 130 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 Q8N402 240 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 DYNC2LI1Q8TCX1 351 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 RAB2BQ8WUD1 216 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 CXorf58Q96LI9 332 aa18.93■□□□□ 0.62
HMGN1-217ENST00000489072 TRBV7-1A0A0A6YYK4 115 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 C2orf70A6NJV1 201 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 LGALS9O00182 355 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 PI3P19957 117 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 TBPP20226 339 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 PTBP1P26599 531 aaKnown RBP eCLIP18.92■□□□□ 0.62
HMGN1-217ENST00000489072 MFAP2P55001 183 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 HSD17B13Q7Z5P4 300 aaPredicted RBP18.92■□□□□ 0.62
HMGN1-217ENST00000489072 ARRDC1Q8N5I2 433 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 ZNF502Q8TBZ5 544 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 C15orf40Q8WUR7 153 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 TMEM14BQ9NUH8 114 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 PRNDQ9UKY0 176 aa18.92■□□□□ 0.62
HMGN1-217ENST00000489072 NBEAL2Q6ZNJ1 2754 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 C15orf61A6NNL5 157 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 CD74P04233 296 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 CLEC3BP05452 202 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 PGAM2P15259 253 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 TMBIM6P55061 237 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 RND3P61587 244 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 CD300EQ496F6 205 aaPredicted RBP18.91■□□□□ 0.62
HMGN1-217ENST00000489072 TMEM229BQ8NBD8 167 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 OR2K2Q8NGT1 345 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 LSM10Q969L4 123 aaKnown RBP18.91■□□□□ 0.62
HMGN1-217ENST00000489072 ZC4H2Q9NQZ6 224 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 C19orf73Q9NVV2 129 aa18.91■□□□□ 0.62
HMGN1-217ENST00000489072 KMT2CQ8NEZ4 4911 aaKnown RBP18.9■□□□□ 0.62
HMGN1-217ENST00000489072 GABARAPH6UMI1 98 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 FOLR2P14207 255 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 SGPP2Q8IWX5 399 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 OR5B3Q8NH48 314 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 MRGPRFQ96AM1 343 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 ZNF486Q96H40 463 aaPredicted RBP18.9■□□□□ 0.62
HMGN1-217ENST00000489072 TSC22D3Q99576 134 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 BCL7BQ9BQE9 202 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 THYN1Q9P016 225 aa18.9■□□□□ 0.62
HMGN1-217ENST00000489072 CCDC59Q9P031 241 aaKnown RBP18.9■□□□□ 0.62
HMGN1-217ENST00000489072 F11RQ9Y624 299 aaKnown RBP18.9■□□□□ 0.62
HMGN1-217ENST00000489072 A8MZ25 164 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 GPR183P32249 361 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 PPP5CP53041 499 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 TAS2R19P59542 299 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 DEFB114Q30KQ6 69 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 SLC25A24Q6NUK1 477 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 CACNG8Q8WXS5 425 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 FKBP11Q9NYL4 201 aa18.89■□□□□ 0.61
HMGN1-217ENST00000489072 TMEM213A2RRL7 107 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 RAB3DO95716 219 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 RPL5P46777 297 aaKnown RBP18.88■□□□□ 0.61
HMGN1-217ENST00000489072 PIGPP57054 158 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 FAM106AQ4KMX7 169 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 STEAP1BQ6NZ63 245 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 H2BFWTQ7Z2G1 175 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 VN1R17PQ8TDU5 208 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 DYNLRB2Q8TF09 96 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 TP53RKQ96S44 253 aa18.88■□□□□ 0.61
HMGN1-217ENST00000489072 ZNF785A8K8V0 405 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 A8MWP6 167 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 MRPS10P82664 201 aaKnown RBP18.87■□□□□ 0.61
HMGN1-217ENST00000489072 UNQ9165/PRO28630Q6UXU0 137 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 GTSCR1Q86UQ5 136 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 TERB2Q8NHR7 220 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 SMIM4Q8WVI0 70 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 DNAH7Q8WXX0 4024 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 SELENOKQ9Y6D0 94 aa18.87■□□□□ 0.61
HMGN1-217ENST00000489072 IGHV3-21A0A0B4J1V1 117 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 ZNF320A2RRD8 509 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 H3BMQ9 156 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 CYB5BO43169 146 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 CBLN1P23435 193 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 SSBP1Q04837 148 aaKnown RBP18.86■□□□□ 0.61
HMGN1-217ENST00000489072 IZUMO4Q1ZYL8 232 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 SCGB2B2Q4G0G5 96 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 FAAP20Q6NZ36 180 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 OR13C8Q8NGS7 320 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 DIRAS2Q96HU8 199 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 TMEM56Q96MV1 263 aa18.86■□□□□ 0.61
HMGN1-217ENST00000489072 RCHY1Q96PM5 261 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms