RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 RBMY1EA6NEQ0 496 aaKnown RBP17■□□□□ 0.31
PTPN4-211ENST00000488279 MARCH11A6NNE9 402 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 RBMY1DP0C7P1 496 aaKnown RBP17■□□□□ 0.31
PTPN4-211ENST00000488279 PTBP1P26599 531 aaKnown RBP eCLIP17■□□□□ 0.31
PTPN4-211ENST00000488279 PLET1Q6UQ28 207 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 OR1L8Q8NGR8 309 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 ZNF502Q8TBZ5 544 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 SLC25A46Q96AG3 418 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 DGCR14Q96DF8 476 aaKnown RBP17■□□□□ 0.31
PTPN4-211ENST00000488279 SRD5A3Q9H8P0 318 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 MLXQ9UH92 298 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 SELENOKQ9Y6D0 94 aa17■□□□□ 0.31
PTPN4-211ENST00000488279 DYNC2H1Q8NCM8 4307 aaKnown RBP17■□□□□ 0.31
PTPN4-211ENST00000488279 TNFAIP8O95379 198 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 OR13C7P0DN81 318 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 GPR183P32249 361 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 LPAR6P43657 344 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 TM4SF20Q53R12 229 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 LYSMD2Q8IV50 215 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 TMEM61Q8N0U2 210 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 GDPD1Q8N9F7 314 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 VN1R17PQ8TDU5 208 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 FCAMRQ8WWV6 532 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 MARC2Q969Z3 335 aa16.99■□□□□ 0.31
PTPN4-211ENST00000488279 SMIM31A0A1B0GVY4 71 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 SNAPC5O75971 98 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 KRASP01116 189 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 SERPINE2P07093 398 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 HLA-DMAP28067 261 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 ANKRD55Q3KP44 614 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 SLC25A24Q6NUK1 477 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 UNQ9165/PRO28630Q6UXU0 137 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 CADM3Q8N126 398 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 WFDC10AQ9H1F0 79 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 RETNQ9HD89 108 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 COMMD3Q9UBI1 195 aa16.98■□□□□ 0.31
PTPN4-211ENST00000488279 GPR31O00270 319 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 HRH1P35367 487 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 WT1-ASQ06250 92 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 OR52B4Q8NGK2 314 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 HINT2Q9BX68 163 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 NDUFA4L2Q9NRX3 87 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 MRPL27Q9P0M9 148 aaKnown RBP16.97■□□□□ 0.31
PTPN4-211ENST00000488279 UFC1Q9Y3C8 167 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 SACSQ9NZJ4 4579 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 STARD9Q9P2P6 4700 aa16.97■□□□□ 0.31
PTPN4-211ENST00000488279 IGHV3-35A0A0C4DH35 117 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 LCE6AA0A183 80 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 SCAF4O95104 1147 aaKnown RBP16.96■□□□□ 0.31
PTPN4-211ENST00000488279 C8orf88P0DMB2 117 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 S100GP29377 79 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 G6PCP35575 357 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 ELLP55199 621 aaPredicted RBP16.96■□□□□ 0.31
PTPN4-211ENST00000488279 TSPAN5P62079 268 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 ZNF585BQ52M93 769 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 LPCAT3Q6P1A2 487 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 BTNL8Q6UX41 500 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 CMTM3Q96MX0 182 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 OR51B2Q9Y5P1 312 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 RYR2Q92736 4967 aa16.96■□□□□ 0.31
PTPN4-211ENST00000488279 TRAV25A0A0B4J276 109 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 TGOLN2O43493 480 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 APOA1P02647 267 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 EIF4EP06730 217 aaKnown RBP16.95■□□□□ 0.3
PTPN4-211ENST00000488279 RBPMS2Q6ZRY4 209 aaKnown RBP16.95■□□□□ 0.3
PTPN4-211ENST00000488279 GPX8Q8TED1 209 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 LSM10Q969L4 123 aaKnown RBP16.95■□□□□ 0.3
PTPN4-211ENST00000488279 LYSTQ99698 3801 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 FAM110AQ9BQ89 295 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 FXYD6Q9H0Q3 95 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 GAR1Q9NY12 217 aaKnown RBP16.95■□□□□ 0.3
PTPN4-211ENST00000488279 FKBP11Q9NYL4 201 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 NSG2Q9Y328 171 aa16.95■□□□□ 0.3
PTPN4-211ENST00000488279 OR2T8A6NH00 312 aa16.94■□□□□ 0.3
PTPN4-211ENST00000488279 PHLDA2Q53GA4 152 aa16.94■□□□□ 0.3
PTPN4-211ENST00000488279 IL17DQ8TAD2 202 aa16.94■□□□□ 0.3
PTPN4-211ENST00000488279 FUNDC2Q9BWH2 189 aa16.94■□□□□ 0.3
PTPN4-211ENST00000488279 ZNF436Q9C0F3 470 aaPredicted RBP16.94■□□□□ 0.3
PTPN4-211ENST00000488279 SCPEP1Q9HB40 452 aa16.94■□□□□ 0.3
PTPN4-211ENST00000488279 PRNDQ9UKY0 176 aa16.94■□□□□ 0.3
PTPN4-211ENST00000488279 F11RQ9Y624 299 aaKnown RBP16.94■□□□□ 0.3
PTPN4-211ENST00000488279 NCS1P62166 190 aa16.93■□□□□ 0.3
PTPN4-211ENST00000488279 OR1L6Q8NGR2 347 aa16.93■□□□□ 0.3
PTPN4-211ENST00000488279 BSCL2Q96G97 398 aaPredicted RBP16.93■□□□□ 0.3
PTPN4-211ENST00000488279 TMEM56Q96MV1 263 aa16.93■□□□□ 0.3
PTPN4-211ENST00000488279 TSC22D3Q99576 134 aa16.93■□□□□ 0.3
PTPN4-211ENST00000488279 VBP1P61758 197 aa16.92■□□□□ 0.3
PTPN4-211ENST00000488279 SPSB3Q6PJ21 355 aa16.92■□□□□ 0.3
PTPN4-211ENST00000488279 SNX29P2Q8IUI4 249 aa16.92■□□□□ 0.3
PTPN4-211ENST00000488279 OR5B3Q8NH48 314 aa16.92■□□□□ 0.3
PTPN4-211ENST00000488279 ATP6V0BQ99437 205 aa16.92■□□□□ 0.3
PTPN4-211ENST00000488279 FAM212BQ9NTI7 297 aaPredicted RBP16.92■□□□□ 0.3
PTPN4-211ENST00000488279 C21orf62Q9NYP8 219 aa16.92■□□□□ 0.3
PTPN4-211ENST00000488279 MFAP2P55001 183 aa16.91■□□□□ 0.3
PTPN4-211ENST00000488279 SCARB1Q8WTV0 552 aa16.91■□□□□ 0.3
PTPN4-211ENST00000488279 TMEM190Q8WZ59 177 aa16.91■□□□□ 0.3
PTPN4-211ENST00000488279 C5orf66Q9H5L9 145 aa16.91■□□□□ 0.3
PTPN4-211ENST00000488279 TMEM14BQ9NUH8 114 aa16.91■□□□□ 0.3
PTPN4-211ENST00000488279 IGHV3-21A0A0B4J1V1 117 aa16.9■□□□□ 0.3
PTPN4-211ENST00000488279 RCVRNP35243 200 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms