RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SPCS2Q15005 226 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 CTF1Q16619 201 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 ZNF57Q68EA5 555 aaPredicted RBP9.39□□□□□ -0.91
SREBF1-215ENST00000487401 DHRS11Q6UWP2 260 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 CMTM1Q8IZ96 169 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 OR5H2Q8NGV7 314 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 WDR89Q96FK6 387 aaPredicted RBP9.39□□□□□ -0.91
SREBF1-215ENST00000487401 ZNF2Q9BSG1 426 aaPredicted RBP9.39□□□□□ -0.91
SREBF1-215ENST00000487401 SRD5A3Q9H8P0 318 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 ZC4H2Q9NQZ6 224 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 COMMD9Q9P000 198 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 SACSQ9NZJ4 4579 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 SORL1Q92673 2214 aa9.39□□□□□ -0.91
SREBF1-215ENST00000487401 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 MFSD2BA6NFX1 497 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 PGLYRP1O75594 196 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-215ENST00000487401 F2RP25116 425 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 GPR183P32249 361 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 THOC7Q6I9Y2 204 aaKnown RBP9.38□□□□□ -0.91
SREBF1-215ENST00000487401 SLC25A24Q6NUK1 477 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 PLET1Q6UQ28 207 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-215ENST00000487401 UXS1Q8NBZ7 420 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 OR6F1Q8NGZ6 308 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 MARC2Q969Z3 335 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 MOB3AQ96BX8 217 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 HINT2Q9BX68 163 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 HIPK2Q9H2X6 1198 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 UFC1Q9Y3C8 167 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 SELENOKQ9Y6D0 94 aa9.38□□□□□ -0.91
SREBF1-215ENST00000487401 RYR2Q92736 4967 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 TEX50A0A1B0GTY4 177 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
SREBF1-215ENST00000487401 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
SREBF1-215ENST00000487401 PFDN1O60925 122 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 SNAPC5O75971 98 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 RLN1P04808 185 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 FGF2P09038 288 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
SREBF1-215ENST00000487401 OR13C7P0DN81 318 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 PTBP1P26599 531 aaKnown RBP eCLIP9.37□□□□□ -0.91
SREBF1-215ENST00000487401 LPAR6P43657 344 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 ZNF846Q147U1 533 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 ANKRD55Q3KP44 614 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 HSD17B13Q7Z5P4 300 aaPredicted RBP9.37□□□□□ -0.91
SREBF1-215ENST00000487401 OR10W1Q8NGF6 305 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 OR52B4Q8NGK2 314 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 IL17DQ8TAD2 202 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 ZNF502Q8TBZ5 544 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 RETNQ9HD89 108 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 MLXQ9UH92 298 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 ANAPC10Q9UM13 185 aa9.37□□□□□ -0.91
SREBF1-215ENST00000487401 IGHV3-35A0A0C4DH35 117 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 MARCH11A6NNE9 402 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 A8MWP6 167 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 GPR31O00270 319 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
SREBF1-215ENST00000487401 KRASP01116 189 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 NAT1P18440 290 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 HLA-DMAP28067 261 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 S100GP29377 79 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 TSPAN5P62079 268 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 ZNF585BQ52M93 769 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 BTNL8Q6UX41 500 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
SREBF1-215ENST00000487401 TMEM61Q8N0U2 210 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 GDPD1Q8N9F7 314 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 S100ZQ8WXG8 99 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 COMMD3Q9UBI1 195 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
SREBF1-215ENST00000487401 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 LCE6AA0A183 80 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 TGOLN2O43493 480 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 SERPINE2P07093 398 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 HRH1P35367 487 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 G6PCP35575 357 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 ELLP55199 621 aaPredicted RBP9.35□□□□□ -0.91
SREBF1-215ENST00000487401 LPCAT3Q6P1A2 487 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 UNQ9165/PRO28630Q6UXU0 137 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 LYSMD2Q8IV50 215 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 FCAMRQ8WWV6 532 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 LSM10Q969L4 123 aaKnown RBP9.35□□□□□ -0.91
SREBF1-215ENST00000487401 SLC25A46Q96AG3 418 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 WDR12Q9GZL7 423 aaKnown RBP9.35□□□□□ -0.91
SREBF1-215ENST00000487401 NDUFA4L2Q9NRX3 87 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 GAR1Q9NY12 217 aaKnown RBP9.35□□□□□ -0.91
SREBF1-215ENST00000487401 FKBP11Q9NYL4 201 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
SREBF1-215ENST00000487401 PRNDQ9UKY0 176 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 NSG2Q9Y328 171 aa9.35□□□□□ -0.91
SREBF1-215ENST00000487401 hCG_2014768A0A024R1R8 64 aa9.34□□□□□ -0.91
SREBF1-215ENST00000487401 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms