RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FOXL1Q12952 345 aa21.37■■□□□ 1.01
HLA-C-208ENST00000487245 ARSJQ5FYB0 599 aaPredicted RBP21.37■■□□□ 1.01
HLA-C-208ENST00000487245 TEPPQ6URK8 271 aa21.37■■□□□ 1.01
HLA-C-208ENST00000487245 PRNDQ9UKY0 176 aa21.37■■□□□ 1.01
HLA-C-208ENST00000487245 NDUFB7P17568 137 aa21.37■■□□□ 1.01
HLA-C-208ENST00000487245 ZNF257Q9Y2Q1 563 aa21.37■■□□□ 1.01
HLA-C-208ENST00000487245 LOC400499M0QZD8 3231 aa21.36■■□□□ 1.01
HLA-C-208ENST00000487245 GNG10P50151 68 aa21.36■■□□□ 1.01
HLA-C-208ENST00000487245 RHOBP62745 196 aa21.36■■□□□ 1.01
HLA-C-208ENST00000487245 RAB31Q13636 194 aa21.36■■□□□ 1.01
HLA-C-208ENST00000487245 RTL8BQ17RB0 113 aa21.36■■□□□ 1.01
HLA-C-208ENST00000487245 SLC25A10Q9UBX3 287 aaPredicted RBP21.36■■□□□ 1.01
HLA-C-208ENST00000487245 XKRY2A2RUG3 117 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 ATP5IP56385 69 aaPredicted RBP21.35■■□□□ 1.01
HLA-C-208ENST00000487245 ASCL5Q7RTU5 278 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 ZCCHC14Q8WYQ9 949 aaKnown RBP21.35■■□□□ 1.01
HLA-C-208ENST00000487245 K7ENP7 123 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 AMBPP02760 352 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 CHRNA7P36544 502 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 FOXC1Q12948 553 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 JOSD1Q15040 202 aaPredicted RBP21.35■■□□□ 1.01
HLA-C-208ENST00000487245 NEUROG1Q92886 237 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 SAP30LQ9HAJ7 183 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 DCAF16Q9NXF7 216 aa21.35■■□□□ 1.01
HLA-C-208ENST00000487245 PPIAL4EA0A075B759 164 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 PPIAL4DF5H284 164 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 PPIAL4FP0DN26 164 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 GCHFRP30047 84 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 SLC35D1Q9NTN3 355 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 SH3BGRL2Q9UJC5 107 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 PPIAL4AQ9Y536 164 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 ARL2-SNX15V9GYD0 113 aa21.34■■□□□ 1.01
HLA-C-208ENST00000487245 TRBV23-1A0A0A0MS06 115 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 TMEM178BH3BS89 294 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 MMP23AO75900 390 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 CA2P00918 260 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 PRR20EP86478 221 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 PRR20CP86479 221 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 PRR20DP86480 221 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 PRR20BP86481 221 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 PRR20AP86496 221 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 EFNB3Q15768 340 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 STPG3Q8N7X2 389 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 C11orf52Q96A22 123 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 SNRNP40Q96DI7 357 aaKnown RBP21.33■■□□□ 1.01
HLA-C-208ENST00000487245 DERL1Q9BUN8 251 aa21.33■■□□□ 1.01
HLA-C-208ENST00000487245 MT-CO2P00403 227 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 CT45A6P0DMU7 189 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 CT45A5P0DMU8 189 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 CT45A7P0DMV0 189 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 IL3RAP26951 378 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 RPL15P61313 204 aaKnown RBP21.32■■□□□ 1
HLA-C-208ENST00000487245 RPL31P62899 125 aaKnown RBP21.32■■□□□ 1
HLA-C-208ENST00000487245 FAM78BQ5VT40 261 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 RND1Q92730 232 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 OR51B2Q9Y5P1 312 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 UPK2O00526 184 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 SFRP2Q96HF1 295 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 FKBP11Q9NYL4 201 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 FUT9Q9Y231 359 aa21.32■■□□□ 1
HLA-C-208ENST00000487245 RIF1Q5UIP0 2472 aaKnown RBP21.32■■□□□ 1
HLA-C-208ENST00000487245 AREGP15514 252 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 PKIAP61925 76 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 PRCDQ00LT1 54 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 GAMTQ14353 236 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 ZNF833PQ6ZTB9 187 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 ZNF114Q8NC26 417 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 SSMEM1Q8WWF3 244 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 LY96Q9Y6Y9 160 aa21.31■■□□□ 1
HLA-C-208ENST00000487245 MDFIC2A0A1B0GVS7 189 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 C1QTNF9P0C862 333 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 ZNF714Q96N38 554 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 YTHDF2Q9Y5A9 579 aaKnown RBP21.3■■□□□ 1
HLA-C-208ENST00000487245 TRBV20OR9-2A0A075B6H5 130 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 CLEC12BQ2HXU8 276 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 C9orf152Q5JTZ5 239 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 OR5T1Q8NG75 326 aa21.3■■□□□ 1
HLA-C-208ENST00000487245 TRAV9-1A0A075B6T8 112 aa21.29■■□□□ 1
HLA-C-208ENST00000487245 SCO2A0A1W2PP80 73 aa21.29■■□□□ 1
HLA-C-208ENST00000487245 LINC00869P0C866 280 aa21.29■■□□□ 1
HLA-C-208ENST00000487245 TMEM37Q8WXS4 190 aa21.29■■□□□ 1
HLA-C-208ENST00000487245 WFIKKN1Q96NZ8 548 aa21.29■■□□□ 1
HLA-C-208ENST00000487245 TMEM106BQ9NUM4 274 aa21.29■■□□□ 1
HLA-C-208ENST00000487245 ZMAT5Q9UDW3 170 aaKnown RBP21.29■■□□□ 1
HLA-C-208ENST00000487245 C9JCJ5 164 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 NDUFB3O43676 98 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 RNASE6Q93091 150 aaKnown RBP21.28■■□□□ 1
HLA-C-208ENST00000487245 PLEKHA3Q9HB20 300 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 SEPSECSQ9HD40 501 aaKnown RBP21.28■■□□□ 1
HLA-C-208ENST00000487245 BET1LQ9NYM9 111 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 SLC45A2Q9UMX9 530 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 ZFHX2Q9C0A1 2572 aaPredicted RBP21.28■■□□□ 1
HLA-C-208ENST00000487245 PLCE1Q9P212 2302 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 J3QR06 171 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 TNFRSF13BO14836 293 aaPredicted RBP21.28■■□□□ 1
HLA-C-208ENST00000487245 GCGP01275 180 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 APOA2P02652 100 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 PAX1P15863 534 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 LRRC10Q5BKY1 277 aa21.28■■□□□ 1
HLA-C-208ENST00000487245 OSR1Q8TAX0 266 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms