RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 ANKRD31Q8N7Z5 1873 aa1.79□□□□□ -2.12
SNRNP27-204ENST00000487029 TANC1Q9C0D5 1861 aa1.79□□□□□ -2.12
SNRNP27-204ENST00000487029 CHD5Q8TDI0 1954 aa1.79□□□□□ -2.12
SNRNP27-204ENST00000487029 TICRRQ7Z2Z1 1910 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 KIAA1671Q9BY89 1806 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 C3P01024 1663 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 RREB1Q92766 1687 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 DIP2CQ9Y2E4 1556 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 IGKV2-24A0A0C4DH68 120 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 LOC285095A0A1B0GVY8 99 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 A0A1B0GW15 77 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 A0A1W2PQL4 384 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 GGT3PA6NGU5 568 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ARL5CA6NH57 179 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CD300LBA8K4G0 201 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 A8MWP6 167 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 IGLL5B9A064 214 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF670-ZNF695F2Z2N8 137 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 F5H5P2 479 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 F8VP50 259 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SMLR1H3BR10 107 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 K7EPK0 472 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SLC17A3O00476 420 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 FAAHO00519 579 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 UBFD1O14562 309 aaKnown RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SLC16A4O15374 487 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ENTPD6O75354 484 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR2J2O76002 312 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 MT-CO2P00403 227 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 IGHG2P01859 326 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 NMBP08949 121 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 PET100P0DJ07 73 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SULT1A3P0DMM9 295 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SULT1A4P0DMN0 295 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 PIPP12273 146 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 TPT1P13693 172 aaKnown RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 GABRA1P14867 456 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 NQO2P16083 231 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 IL12BP29460 328 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR10J1P30954 320 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SNCAP37840 140 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CAPZBP47756 277 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 TTPAP49638 278 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 NDUFA6P56556 154 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 DCDP81605 110 aaKnown RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 FMODQ06828 376 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF235Q14590 738 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SMIM21Q3B7S5 101 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 LGALSLQ3ZCW2 172 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SPANXN3Q5MJ09 141 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 FAM74A1Q5RGS3 127 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 BCL2L15Q5TBC7 163 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SAMD13Q5VXD3 122 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SMARCD3Q6STE5 483 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 TMEM144Q7Z5S9 345 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF738Q8NE65 137 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 PLPP5Q8NEB5 264 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR51D1Q8NGF3 324 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR8J3Q8NGG0 315 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR52E4Q8NGH9 312 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR5L1Q8NGL2 311 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR10D4PQ8NGN7 298 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR2V1Q8NHB1 315 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SPPL2BQ8TCT7 592 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 BLNKQ8WV28 456 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 DNAJB3Q8WWF6 145 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CCL17Q92583 94 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CPNE2Q96FN4 548 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SFRP2Q96HF1 295 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CPB2Q96IY4 423 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 PACRGQ96M98 296 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 NIPSNAP1Q9BPW8 284 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 MRPL57Q9BQC6 102 aaKnown RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SUCNR1Q9BXA5 334 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 PARD6GQ9BYG4 376 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 OR8D2Q9GZM6 311 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CHST5Q9GZS9 411 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 GABARAPL1Q9H0R8 117 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ABCG5Q9H222 651 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SMDT1Q9H4I9 107 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SLC2A9Q9NRM0 540 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 UBQLN4Q9NRR5 601 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 C1orf109Q9NX04 203 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SPANXCQ9NY87 97 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 CCDC167Q9P0B6 97 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF492Q9P255 531 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 COMMD3Q9UBI1 195 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF230Q9UIE0 474 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 NXT1Q9UKK6 140 aaKnown RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 SLC22A13Q9Y226 551 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 BTRCQ9Y297 605 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF706Q9Y5V0 76 aaPredicted RBP1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 ARL5AQ9Y689 179 aa1.78□□□□□ -2.12
SNRNP27-204ENST00000487029 TRIP11Q15643 1979 aa1.78□□□□□ -2.13
SNRNP27-204ENST00000487029 PTPRFP10586 1907 aa1.78□□□□□ -2.13
SNRNP27-204ENST00000487029 RBBP6Q7Z6E9 1792 aaKnown RBP1.77□□□□□ -2.13
SNRNP27-204ENST00000487029 ARFGEF2Q9Y6D5 1785 aa1.77□□□□□ -2.13
SNRNP27-204ENST00000487029 KIAA1551Q9HCM1 1747 aa1.77□□□□□ -2.13
SNRNP27-204ENST00000487029 RIMBP3CA6NJZ7 1639 aa1.77□□□□□ -2.13
SNRNP27-204ENST00000487029 RIMBP3BA6NNM3 1639 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms