RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CD46P15529 392 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 CHRNB4P30926 498 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 CAMPP49913 170 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 SPRNQ5BIV9 151 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 CENPWQ5EE01 88 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 STPG3Q8N7X2 389 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 MIEN1Q9BRT3 115 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 B4GALT7Q9UBV7 327 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
HSPG2-211ENST00000486901 A0A1B0GWJ7 208 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 H3BTX0 84 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 VENTXO95231 258 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 TYMSP04818 313 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 IL6RP08887 468 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-211ENST00000486901 GCHFRP30047 84 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 MEOX1P50221 254 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 ZNF134P52741 427 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 LCN2P80188 198 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 DNLZQ5SXM8 178 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 DUX4L9Q6RFH8 374 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-211ENST00000486901 C6orf15Q6UXA7 325 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-211ENST00000486901 C1orf210Q8IVY1 113 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 FAM168AQ92567 244 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 HIPK2Q9H2X6 1198 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 CLCF1Q9UBD9 225 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 TNFSF15O95150 251 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 ATP6V1FQ16864 119 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 DCAF10Q5QP82 559 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 FAM173AQ9BQD7 235 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 MBNL3Q9NUK0 354 aaKnown RBP10.25□□□□□ -0.77
HSPG2-211ENST00000486901 PILRBQ9UKJ0 227 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 COL12A1Q99715 3063 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 TRAV5A0A0B4J249 113 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 SH2D7A6NKC9 451 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-211ENST00000486901 TOX4O94842 621 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 EFNB3Q15768 340 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 SRSF7Q16629 238 aaKnown RBP eCLIP10.25□□□□□ -0.77
HSPG2-211ENST00000486901 Q56UQ5 140 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 ZC2HC1AQ96GY0 325 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 ZGRF1Q86YA3 2104 aa10.25□□□□□ -0.77
HSPG2-211ENST00000486901 DUSP3P51452 185 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-211ENST00000486901 RND1Q92730 232 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 KCNIP2Q9NS61 270 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 TNFSF13O75888 250 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 RELBQ01201 579 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 OR2Z1Q8NG97 314 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 LRRC29Q8WV35 223 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 PKIBQ9C010 78 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 PLEKHA3Q9HB20 300 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 TRBV6-6A0A0A6YYG2 114 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 GNG4P50150 75 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 FBXW9Q5XUX1 488 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 MOB1BQ7L9L4 216 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 SNRNP40Q96DI7 357 aaKnown RBP10.24□□□□□ -0.77
HSPG2-211ENST00000486901 PCED1AQ9H1Q7 454 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 TMEM140Q9NV12 185 aa10.24□□□□□ -0.77
HSPG2-211ENST00000486901 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 RELNP78509 3460 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 OOEPA6NGQ2 149 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 FAM90A26D6RGX4 464 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 RAB29O14966 203 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 ERVK11-1P61568 191 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 RPEL1Q2QD12 228 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 BCL2L2Q92843 193 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-211ENST00000486901 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-211ENST00000486901 S100A7P31151 101 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 PRB3Q04118 309 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-211ENST00000486901 FOXL1Q12952 345 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 CD177Q8N6Q3 437 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 TMEM45BQ96B21 275 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 PCSK5Q92824 1860 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 HELTA6NFD8 242 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 CA2P00918 260 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 STAG3L2P0CL84 134 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 STAG3L3P0CL85 134 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 COMPP49747 757 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-211ENST00000486901 ZNF586Q9NXT0 402 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 TCF19Q9Y242 345 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 WIPI2Q9Y4P8 454 aa10.23□□□□□ -0.77
HSPG2-211ENST00000486901 TNRC18O15417 2968 aaPredicted RBP10.22□□□□□ -0.77
HSPG2-211ENST00000486901 IGKV3D-15A0A087WSY6 115 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 GFRA3O60609 400 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 CXorf1O96002 111 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 OR5G3P0C626 314 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 DUTP33316 252 aaKnown RBP10.22□□□□□ -0.77
HSPG2-211ENST00000486901 ZNF83P51522 516 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 HNRNPA3P51991 378 aaKnown RBP10.22□□□□□ -0.77
HSPG2-211ENST00000486901 ERVK-16P61578 105 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 ZNF146Q15072 292 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 PMS2CLQ68D20 193 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 ETFRF1Q6IPR1 90 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 TRIB1Q96RU8 372 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 ASCL2Q99929 193 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 MYO18BQ8IUG5 2567 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 IGHV3-21A0A0B4J1V1 117 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 A8MXE2 369 aa10.22□□□□□ -0.77
HSPG2-211ENST00000486901 YPEL1O60688 119 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms