RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TONSLQ96HA7 1378 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 STRCQ7RTU9 1775 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 C9orf84Q5VXU9 1444 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 IGKV3-7A0A075B6H7 116 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 TPM3P06753 285 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 UCHL3P15374 230 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 RAB5BP61020 215 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 CD200R1LQ6Q8B3 271 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 RPS19BP1Q86WX3 136 aaKnown RBP0.93□□□□□ -2.26
LTN1-206ENST00000486427 DHFR2Q86XF0 187 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 GID4Q8IVV7 300 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 ZNF676Q8N7Q3 588 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 OR8B3Q8NGG8 313 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 XPNPEP1Q9NQW7 623 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 NKIRAS1Q9NYS0 192 aa0.93□□□□□ -2.26
LTN1-206ENST00000486427 FREM1Q5H8C1 2179 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 INMT-MINDY4F8WBC2 141 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 SLC22A1O15245 554 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 ACOX3O15254 700 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 NOS1APO75052 506 aaPredicted RBP0.92□□□□□ -2.26
LTN1-206ENST00000486427 KCNE1P15382 129 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 CCR7P32248 378 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 FXYD2P54710 66 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 TPM4P67936 248 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 RPL18Q07020 188 aaKnown RBP0.92□□□□□ -2.26
LTN1-206ENST00000486427 CDK5R1Q15078 307 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 C15orf53Q8NAA6 179 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 ZNF439Q8NDP4 499 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 OPTNQ96CV9 577 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 ERMAPQ96PL5 475 aaPredicted RBP0.92□□□□□ -2.26
LTN1-206ENST00000486427 OR51I1Q9H343 314 aa0.92□□□□□ -2.26
LTN1-206ENST00000486427 BAZ2BQ9UIF8 2168 aaKnown RBP0.91□□□□□ -2.26
LTN1-206ENST00000486427 SETD5Q9C0A6 1442 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 BRWD1Q9NSI6 2320 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 CLPSP04118 112 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 NFYAP23511 347 aaPredicted RBP0.91□□□□□ -2.26
LTN1-206ENST00000486427 ZNF80P51504 273 aaPredicted RBP0.91□□□□□ -2.26
LTN1-206ENST00000486427 SUPT4H1P63272 117 aaKnown RBP0.91□□□□□ -2.26
LTN1-206ENST00000486427 NDUFA5Q16718 116 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 COQ5Q5HYK3 327 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 SYPL2Q5VXT5 272 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 GLT8D1Q68CQ7 371 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 CNBD2Q96M20 576 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 EFCAB1Q9HAE3 211 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 IL36BQ9NZH7 164 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 BAIAP2Q9UQB8 552 aa0.91□□□□□ -2.26
LTN1-206ENST00000486427 EVC2Q86UK5 1308 aa0.9□□□□□ -2.26
LTN1-206ENST00000486427 A0A0J9YY10 115 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 A0A1B0GX78 115 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 GGT3PA6NGU5 568 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 SDCBPO00560 298 aaPredicted RBP0.9□□□□□ -2.27
LTN1-206ENST00000486427 ISG15P05161 165 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 AP2S1P53680 142 aaPredicted RBP0.9□□□□□ -2.27
LTN1-206ENST00000486427 CCL20P78556 96 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 COTL1Q14019 142 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 ZNF345Q14585 488 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 GUK1Q16774 197 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 CDKL4Q5MAI5 379 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 ALKAL1Q6UXT8 129 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 C10orf67Q8IYJ2 551 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 C1orf158Q8N1D5 194 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 OR5B17Q8NGF7 314 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 CISHQ9NSE2 258 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 PCDH15Q96QU1 1955 aa0.9□□□□□ -2.27
LTN1-206ENST00000486427 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 MAST2Q6P0Q8 1798 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 A0A1B0GV50 99 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 IRGMA1A4Y4 181 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 HCRTO43612 131 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 PRM2P04554 102 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 IL9P15248 144 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 CTAG1AP78358 180 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 PLCXD2Q0VAA5 305 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 C10orf55Q5SWW7 151 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 IBA57Q5T440 356 aaKnown RBP0.89□□□□□ -2.27
LTN1-206ENST00000486427 PTH2Q96A98 100 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 YIPF3Q9GZM5 350 aa0.89□□□□□ -2.27
LTN1-206ENST00000486427 TENM3Q9P273 2699 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 FABP5P3A8MUU1 101 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 PMP2P02689 132 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 OR5G3P0C626 314 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 METTL15P1P0C7V9 234 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 RNASE3P12724 160 aaKnown RBP0.88□□□□□ -2.27
LTN1-206ENST00000486427 PMAIP1Q13794 54 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 SURF2Q15527 256 aaPredicted RBP0.88□□□□□ -2.27
LTN1-206ENST00000486427 KISS1Q15726 138 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 OR2T4Q8NH00 348 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 FAM96AQ9H5X1 160 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 RALGAPA2Q2PPJ7 1873 aa0.88□□□□□ -2.27
LTN1-206ENST00000486427 DLG5Q8TDM6 1919 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 TRBV20OR9-2A0A075B6H5 130 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 TGOLN2O43493 480 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 DCTN3O75935 186 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 RPS4Y1P22090 263 aaKnown RBP0.87□□□□□ -2.27
LTN1-206ENST00000486427 TCL1AP56279 114 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 MAGOHP61326 146 aaKnown RBP0.87□□□□□ -2.27
LTN1-206ENST00000486427 GRK1Q15835 563 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 Q6ZS49 121 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 TMEM86BQ8N661 226 aa0.87□□□□□ -2.27
LTN1-206ENST00000486427 C11orf40Q8WZ69 217 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms